| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT43396 | chr3R 13777218–13779352 (2134 bp) | cpo, Rim |
      active |
lateral epidermis primordium subset, clypeo-labral primordium, head subset |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | not active | 0 |
| 11-12 | lateral epidermis primordium subset | 3 |
| 11-12 | clypeo-labral primordium | 3 |
| 13-14 | head subset | 3 |
| 13-14 | lateral epidermis subset | 3 |
| 13-14 | dorsal epidermis subset | 3 |
| 13-14 | head epidermis lateral subset | 3 |
| 13-14 | clypeolabrum | 3 |
| 15-16 | not active | 0 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0263995 | cpo | overlapping | BDGP FlyBase |
| FBgn0053547 | Rim | 34919bp downstream | BDGP FlyBase |
| FBgn0263399 | CG43445 | 39452bp downstream | BDGP FlyBase |
| FBgn0038558 | CG12347 | 44046bp downstream | BDGP FlyBase |
| FBgn0000477 | DNaseII | 67879bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
ctggagtggtggatttgtggtgtggcattgggtaaccagtcagtcaccagggcaatggcaatggcaaagtgcactgcggataatttccacttccgacatgaaacatgacaaaccagccgcccggcaaaacacacggtggtccgaaagagatggatactttgtgagtgccggtgtgcgactgggacagcgacagggcgaacagcgaacagatgggcgacaggaagaggaagagccaaagggtcaggaagggagcgccgctgggccaaaacgcgaaccggtgacgaggtcaaaccaagactattaaaacaaaaaagcattacaaaatacgagaagagttggactgctgggaaggtcgaacgcgggaataccctgtcatatagagtttttagtgctagaaatgaaaaattggttggaacttaaaaataataccaaataagcgaataattctgtcatttctattaggtgttcacaccgaaaaattcaaataaaaaagtaatgaaatgtaatgtatttttgagaactaaccaaaatacgcaaatattcaacaaaggtgtggatacgctttcttcccttcgataacgtcgaacttctgggaattataatggaaccctatgtaagggtataacaaccaagaacagaaccaaaaaaagaaaaaagcgacatcagcgagtttaaagaccaaaggcggctgctcccatgtgtccatgtatggccatttattactgtagtccatgtgtatctgtatctgtgtgctctgtgtatagttttaatcaaactgcgacttggccacgttttgctttagcgcctttttttttaaggtgcggttcagtggcctttggttggtcataaaaccaattgcgaagcgggccagaaagaggaaaccattgccatcagctgtcgcgcggctcgtttttaggggcaggacaacaaggcatgacaggatctggaaatagtggcaaggagttctcgaaaccagcccaaaactctgaatacgccagcaccgaccaggggttgcacaaccaaggttaggggttcgttttcgttcggtggctcggccaccgtaatttactaccagcatgagtcggagcaaaagcgtcgaaagacctgcacgcaaaccaaatgaacatgcaacattaatacatggttacacacacacacacacacacacatgcagcggggtcaaggagccgggtgtttggggcgggggttggcaaggacccgaggggtggaagtggccaaaaaggtatactgtatttttacagtaaccaggcaataaatttcgaaattttattgtaggcgcacgtgcttagctggaagccatatgcactcgaagaaattataaactgtactctacagtccaattataattcatttcctaaatgttcaataacaaaaggaaaaaagatttcagaatatgtatcttaagaaaatatacataaatttcgaatgttctaaaatggaaaattcaatttcgaatcaatatgtttgtatcttcagaacaaatattgttttgctacttgtttgttttgcccatcaaactcttattcctctcgtacctcttagcctctcaaaaattgtcaaacatttatttataaacaaattggccatttgcattgagtgtcgtcttccgctgattgattgttgaatttgcctcgtttcatatttatgtacacatcacagagatatctgagagatacagatacagatacagaaacgttgctttcgtttcgagcaatttatcaaaaggctttagcctccatggcaccttaaattgataaactatgcaaaagatgcaaatgtaacgcgccaatccatctcaatgtgcggagatgagtttcatatatttgccgtgtcaagcgtttcgttttgagtttgaggtgctggtacatatttgatattggccatatggattacccaattcccggcaagccaacaacaatgaactcctacatatattacacaatattcgcagtacccgcaactgcgaaatgtgagatgtttgagcgacgtgcgacgagcagcggagctctacaagtgcacgacagcagatacaaagatacagataaacttagatatatgtagatactgtagatactccacactcttgagctagaaatgccgctcatgacgcaaac
PCR verification status
Line verified as correct.