Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT43643 chr3R 14260664–14262821 (2157 bp) fru, CG31122 activityactivityactivityactivityactivityactivity
active
head subset, head epidermis subset, trunk epidermis subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10not active0
11-12interstitial cells primordium2
13-14ventral epidermis subset2
13-14head epidermis subset2
13-14midgut interstitial cell3
13-14midgut subset3
15-16head subset4
15-16midgut chamber3
15-16head epidermis subset4
15-16trunk epidermis subset4
15-16midgut interstitial cell3
15-16atrium4
15-16telson broad4

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0004652fruoverlapping BDGP FlyBase iFly
FBgn0051122CG3112222069bp downstream BDGP FlyBase
FBgn0038621CG1086423312bp downstream BDGP FlyBase
FBgn0038619CG768528941bp downstream BDGP FlyBase
FBgn0264816koko30217bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

cgcccaggccgccagtgtaattactcggcccacgtccggtcggcgaactggccgccgaatcgcgcagcttgtcgcagtcggagcggtagttcagattgttgttatctgtgagaccacgcacctggaaaagtcccaaataacgtacatattattataagttcatattaaattgttgttgttggggtagcggacacaaattcgggaattccccagtttgataagcaagactatttattacatgtggtctggcacactttgtttcgcaagactcgcttaataataactaatttaaagtaagccgacaacatatttcttcgccatactttaaagcttgtgaatgactctgatattctttatgccttaaatacaagcaaaaaaggatgtcctaaagtcgtgtcccttaaaatagatccctgatttgcacacacctgcaggctctcggccgtcttgagaaacatgggcagcgaactctggcccacgttgacctcgcccttgtacatgaagtcgagcagagatcgcatctctgagtatctgacatctttcaagtagatgatgggatgtggatgctggttctgtaggaaaatcgtctcgaagtacggactgcaggctgacaggatggtctggtgagcctgcaatagaatgaatatgaaataatgtcagatatgtatatctatatctttaagtgtatctcatggacgcaccttgactgtttcgccctcgcaggcgagcgtgacgtcgcatagcgcctcccgctgcagcagtgaggttagcacgccggtcaaatttgtgggatgattgttccagcgcaagcagaattgctggtccatcgctccttggtcagtgttgtacctgtaatatagagtataaatgcataagtatgtgacgcaacaagagcataatcaaaatgttccttaaattcatttaattcttttggtctagtttagcgcctgctttgtttatttattagctaaatcttacacatttatggtaatgcagacttaatgggaaaatcccatgcgataatactcgaaaatttctccgttcgctatatttttcaaccggaaacggaagtgttacgctttcgaccccgttatctttatcgccgccatggtccacaatttttggtcgtgtgtaacggtgtacaagaaataccaatgataatttgtcattgaacacaattgctcattacaattaccaaatgctcggggctgttctcaattatttattgcatttccggtgccagataacaaaccgcaccgtgtgtgttgttgtttttgttgctgttgttgtggtgctgccaactccacaagctccgcaaactccacagttgcatctgtattagagtgttaattgccattttgccatgttgccgccatgtttggctgctggctaactgttaattactcggccaaatagacgagcaatccatgcaaatttggttgacacaccgatggaagggactggtggcataatggatggcattcgtggcttatctatcgcaaaatttattgagcaccctacaccccctaaaccctacacacccccttacagcgcccaagaggctaagaatagagtttatatgcatatgcttatatttctttattacattcgcctggaatccaccacctaatctcaacggcctttggccggagtctagtgccgtttacagggggtaaaataaagggggcaaaatgcggctctgataagaggcacttttgcttttcttttgatcgattcgagaacttattcgactttgatactaccggtaaatgttacaaataagttaagtgaagtgaaaaaagtattaataccactgcgattttcaataagaatcgtaaagtagtctacgaaactaccagtttctataactttacatacaattttataaggttagtgattggattgcccatatgaccaacgaataccctgtaaaaagagcaaagctaagagcgatcgacagagctttaagcttttgccggcgacgctgcagagcctaacaaaataaataaacaaaacgtcaaagaactttttcgcaaaccgaaatgctgaccgtgagaaagaggtgttcaatggggagcgaaagagagggctagatgcgccacacaaaagagaggggggggggaatagtgggaaaaacagtgaaagaaagagagagaga

PCR verification status

Line verified as correct.

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