| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT43788 | chr3R 14532826–14534900 (2074 bp) | VAChT, Cha |
      active |
ventral nerve cord subset, posterior endoderm AISN, dorsal ectoderm AISN subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | posterior endoderm AISN | 3 |
| 4-6 | dorsal ectoderm AISN subset | 3 |
| 7-8 | dorsal ectoderm anlage subset | 3 |
| 9-10 | not active | 0 |
| 11-12 | not active | 0 |
| 13-14 | ventral nerve cord subset | 3 |
| 13-14 | brain subset | 3 |
| 15-16 | ventral nerve cord subset | 4 |
| 15-16 | brain subset | 3 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0015323 | VAChT | overlapping | BDGP FlyBase |
| FBgn0000303 | Cha | overlapping | BDGP FlyBase |
| FBgn0085311 | CG34282 | 11329bp downstream | BDGP FlyBase |
| FBgn0038643 | CG14300 | 13399bp downstream | BDGP FlyBase |
| FBgn0038642 | Muc91C | 14386bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
tagtctgcagaaacctccatcggcatttaatgcccaaattcctctgctggtcgttgttctaggacttttctgcggtcaccaattgagaatcaattagccgagaatcgcaaacaaatgcctttattagatttcgttggctaatcaaatttgtgtctgctgtcccattaaatcattaagatcctcgtctggtggaatgtgtagatggtctagtcgtggtccggctgaagttcattaaggctgatactaccactaccactactgtcatccatgggccagaggagacgccaccatgccgaaagccacctgccagaggaagcaattttctctggtgctgcggctgctgcataatgaaggcaataaatataaatttcacacacaaacacaaacaagacgacgccgtcgtcattagattgtttgccttgtagacgcgtttgtaacgctgatgtgttcatagcggtttcgtgtcaaaacaaaagggggcgcaccaccacccagtcaccaccaccaccagaaaccaccgagaaactacagaccgagtttctccttccttattttctacccatctacggcagcccgaggggatggaaaaatgccagaaacaaaggctggcaggaaggtagctcgtaataagctaaacgagaaacaagtaacgcatttgtcttgatgccgtctgataagaacgcgcccgtacatctcgagggttgcccgctcggcattgagccatcaggattcaggaagggggacaatgcggcaaggggctggcggatgaaagggaagaaagggggagaaagaagctggagctggatctggaccagaagttgcacccaaatagcgccatcaaaagtcgtaaacgggtcgctctgatggtgttgttgattgctccgcatttgccaagctacaaatggttacattttaggccctgggttcgatgctggaaattagcaatttgccaggacgaatacgatatcgcagttattaataaaaaatgcacgtagagaaaaattgggtgtactcgtatataaaagcaaaatatactctcgagcgtgaactactaatctcacacgagttaaactatatgaataaaaaaaattgtcaacagcttcatgttttggaatcatactttctagtggcttgcagttgtaatttaaaatagttggaaattgttagatgtctgaggaatcatcttctgtctattgttctctgtgcacaaaactacttgaaacacgaactgctgaatgggagacataaaggtaaattacttttaccctgcaaaaaaaaaggcattgagtgcggcaagtccgagtaatttatgtggaaatcaatttgtaatccaacgctcacagttgaccaaaaaagggatgttcggtggaaactggacatgtgtgcaaaaacacggacattagacacgcacacccacacggggaagatcgagaaagaggaaaccatttggagctcactcccccccaatagccccgcccatttaatgttttgatttatagacagaccccatccactcctccgcactaaaggagctgctccatacgccccgtggtaccatcagtgccacctaaatgacgccctttgtgcgctcgtgctcctttatttccatttcggggcagctggaaactggagtacggatcctcgggctaagtggctgcgtgtccactgggagttgataaaagcacatcagcgcggcaacaataagagcaataaaaacaaggacctgcagcacagagggttgcttacaaaggcacaaagggatagataccctgtttaaattgacattttccatcgtcccaaaaactttggcaattaaaaaagtgctttacaacgactagccgagctaaggccaaccgggtaaaatcgattgtacacgaatcgcaagaccgcgacaagacaattaaacttgaaacagaaatgtcacttggcagtcgagtaaacacttggcagtcggaagagggttaaggtaacgctagcaacgctggccaagttaatcgatcaagagtggccaaggtgaggctcattagctggtcacagttcattagagccaattgctcgggaacgtgtcttagcca
PCR verification status
Line verified as correct.