| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT4432 | chr2L 8809398–8811511 (2113 bp) | SoxN, CG42710 |
      active |
procephalic ectoderm AISN, anterior, brain anlage broad |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | procephalic ectoderm AISN | 4 |
| 4-6 | anterior | 4 |
| 7-8 | ventral ectoderm anlage | 3 |
| 7-8 | procephalic ectoderm anlage | 3 |
| 9-10 | brain anlage broad | 4 |
| 9-10 | ventral nerve cord anlage broad | 3 |
| 11-12 | brain primordium broad | 4 |
| 11-12 | ventral nerve cord primordium broad | 2 |
| 13-14 | brain broad | 4 |
| 15-16 | brain broad | 4 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0029123 | SoxN | 16247bp upstream | BDGP FlyBase iFly |
| FBgn0261627 | CG42710 | 26899bp downstream | BDGP FlyBase |
| FBgn0032069 | CG9468 | 28147bp downstream | BDGP FlyBase |
| FBgn0032068 | CG9466 | 33136bp downstream | BDGP FlyBase |
| FBgn0032067 | CG9465 | 37055bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
atatgtccccgcgaggttggggttacttgagcaccgaaaacgtgtgattacgttgccaggtatagcccccaaaaaaggtacagttgtgctcaaagcacattagcatttaaaatattatatttaatcttgtattaagaaaggaataatgtttatatttttattagttttcatttgcataagcatccgttgaaaaattgtagctatgtggatttatcaagccaatccctccaccagcactgctgacagccatcaagtcaactcggcttacggtcaggatcgaattcaatccgggccgagatttcggctcagatcgaaggactcaatccggggcccagtttttcgttctaattcgccttaagccttctgaaactgccgctcccaattccgagacccatgtttgctacactgaatccagaatggaacacacaaaccgattccagagtacatgtttcccgaaatctgtatttcattttggcaaggaacaaaacccgacaccgctcgctccgaaggaccaaccctcctgtcaggacgagaaatcgggaccgaatcgagggccaggtgtgcccgtgccggtgcgcaatcagctttgtaggcgatttgtgaggattaaactgtgcactggaggcgatcagtgagtgcgaaagagtgagaggggagtgttggaaagggatgattgcctacctgcgggactctgcgatcctgcgatccttgtaggaggatcaatttgctgactaaatacgcacggaaaggtgtatccgtaaaatctgccagatacacacaacacactcacactacatggtttttgggggcagaggataaatgcttaattttttgcgtttcaatgggcactttgagtgcacaccgaaaatccgaaattggaaaattgaaattctggaaaaggtataataatttcatgcttcctggtaattggcaaacaacagcaggatggcccacagttggcaacagggtttgctctgcaaacaagttgggatcggtactctggccaggtggcttcaggttttctgtactccttgggggttgaattcatcgcctcgtgttcatgcaaattactgttcctttcaaatcttagcgaaataactgcgcagttgtaacgggttgggacctgaataattgcgatcttccattaagcctgaggtgcctgtcacaaaggttgtttgccagggcccccaaactgttggtactactcagcagcaattgcaacacacacaatcgtccaaaagtccactgcatacaacacattacatcgatcatcgtcattcgctgcctgccattgtgtctgcctcaggtgttccagccggcggggatttgagagggagatccgttcagatacttgtcatgttattgcgccgttggcatttttccatctcgagtcccaaactccccctttgagtcgccctcatgccttcaactattgcgcaattggcactgcatttctgcactttctgttgctcttgccgctggcgaatgatttctgagattttctgaagatttcatctgcttaacatcgctggttttcgtcactcaatgggataatgcgaatggaaaaggattattaaaaaaagaatgatatgaaaaacactgataattaaaaaacaaatactctatgcattaatattgataattaataaaacacatatgactagatttcgtctacgaatatatatttatcttacttttgctcaagttataaccatatgtggtacaattgaaaatagcgagctataattgagatttgaatccagagctcaactgttaactggtaataaaaatttgaggtaacctattatttaatgtaatttcccaagctgttcggaacaagtgatctttattagcattcccaccgtcaccagcaccgacaggatacaaattttacggctcctgcacacattttcccaccaatcgaggagggcggcattcccaataagtcccatgcaattttcattgacaatggccagccgcaggatatattcggcatgagcaaatacaataaaaatacctgttggctgttgctgaatagaaggatggatgcatttacctatatcattatacggccattgtcggttgacgggcaagtcgggaaaacgggaaaaacg
PCR verification status
Line was not verified.