Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT4444 chr2L 8834768–8836868 (2100 bp) SoxN, CG32986 activityactivityactivityactivityactivityactivity
active
head epidermis broad, trunk epidermis subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10not active0
11-12not active0
13-14head epidermis broad4
13-14trunk epidermis subset3
15-16head epidermis broad4
15-16trunk epidermis subset3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0029123SoxN5099bp downstream BDGP FlyBase iFly
FBgn0052986CG3298628008bp upstream BDGP FlyBase
FBgn0052987CG3298729043bp upstream BDGP FlyBase
FBgn0052988CG3298830096bp upstream BDGP FlyBase
FBgn0052983CG3298331082bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

cgaaatggcgactacgacctgaccggactccgaaacccagactctgcagcaggaccagaatcacagacacatgagtgcaaaagctgccgataaatgcgacgaagtcgggagctgcagtactgcaatcaagctgacccatgcacagtggtcgcaaagtgatttatttgggggaagtattcagttgaaatgattccaatagcaattaataagtataataagtcattcattgctcaatagaacaggcaccaggcataaaatttatccatgctgaaatactttttaagataatatttaaatcagtaaaaaaaaaaacagcatccgcaccactgtgcgatggcaattcggttgtagcttatgttgcattaagaggggcaaaatgggaatggggcgggcagcatttacatacgcacaccgtctcatacttatttcgaacatttcgccatgtccggcaaagcgacgtcatttgaacagcaatgtcagccccactgaatgactgactgactgcctgaatgacggactggcagactgacggactgctggattgatcaagcgtcgcagtgaccaatgaaagccgacgtctgtgccgtctagatagggcgtgcagctttttgctggaatgtgtgtgcgctgattgattgattatttgttccgcatcactcacctggaaaattcaactgaagtggcaactttaattaatttgcttatgtttgttggcccgactagcctcaaaggccgggccaagccattggattttatatggcgaaaatgtacagcatatatgtatgtaaataggagtgtatatgtggtatataagatccgcacgagtacataatttaatagacttgggctgggctgcaactgaacttaattacaggggcatataatttaatttaaatatatacatatagaaactatctgtctgtgacctgaattctcatcggaagtcaacttcaagcacacaatatgatgtcatgtgtcatgctaaacttgtttacttcgtattctgctaggcaaatcatcgtcatagcttctatctaagtaaaattaatcgatattaacctagtaaagaccattgattgtacataaattcggagttcaaagcccagctgtggggtaaacaaatctacaaatcaagataactgttttcacacatctaggcctatcaacaatggaaaaccagaatatcaaatgtatcaaaaacaaaaagacgctgaccaaaaactaacaaaatccgagcgttgcgatgacaagaaaatatatttaaaataccaaacgagacttgacaaaaagcataacaaattaagacttataatttagcgtgcgccaaaataccgtttttcagatggatcgaccgactgatgaaaacaatgggacctgcggagatcttcggttgatttgtttatgagaaaacccgacggggcatcgtacctgcattgaatcccccgatttcgttgtcattttatagcattttaaacgccaaatttatcatatcccctctgtgtggaccatcccaaatagctccaactttctttccagccaaatggaactcgaactaagctggtatgtatctgtcgcgaccccaggcattaattaaagacccgatgtattgactatttgacaatgatttctggccaagagtgtttcgatctatgcgatagaacacagatttagacccacttgtgtctcgagcggattttgctactatttttgggagctggcacaatcgagtcaagtggcatttgtgatctgtgctgccaatcgacagaattaaagagtttttttaattttgcgttgagctttataataattacgtaaatattttgtttgctcacttgcattctcccctgccaatggattaaagccaatacaactagttgccacttaatcattagctcgcctcacttgatccacttggtggaatccacttaggctaaattagtttgctgactagttgttttgccgctgagtggaaccaattaaaggcccaaaaatgtgggctggccaacgaattgatagggtgtaataacataaaaaagggagatttagcaataaaaagaaatttgggcaaaggcggcagctgtcgaggagcgtggtgttgtca

PCR verification status

Line verified as correct.

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