| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT4447 | chr2L 8839795–8842046 (2251 bp) | SoxN, CG32986 |
      active |
head mesoderm AISN, head mesoderm anlage, head epidermis broad | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | middle | 3 |
| 4-6 | yolk | 3 |
| 4-6 | procephalic ectoderm AISN | 3 |
| 4-6 | head mesoderm AISN | 4 |
| 7-8 | procephalic ectoderm anlage | 3 |
| 7-8 | head mesoderm anlage | 4 |
| 9-10 | ventral epidermis anlage broad | 2 |
| 9-10 | brain anlage broad | 2 |
| 11-12 | brain primordium broad | 2 |
| 13-14 | ventral nerve cord subset | 2 |
| 13-14 | trunk epidermis broad | 2 |
| 15-16 | head epidermis broad | 4 |
| 15-16 | trunk epidermis broad | 4 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0029123 | SoxN | 10126bp downstream | BDGP FlyBase iFly |
| FBgn0052986 | CG32986 | 22981bp upstream | BDGP FlyBase |
| FBgn0052987 | CG32987 | 24016bp upstream | BDGP FlyBase |
| FBgn0052988 | CG32988 | 25069bp upstream | BDGP FlyBase |
| FBgn0052983 | CG32983 | 26055bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
ttcgaagaaaatgctttgcttgccttaaagttatttaaatatgatatttctaattagaaaaaaataatatgtaagtaggaacgtacaattaatatttgtcgatttattagatatgaaaaacaaagctaaaactacttccacaagagcttaatttaatttagatttttcaagccgttacccaaccaatcaaccagataaatgcttgagaaatttcaaatatttaatttatattgtgccatacacccaccactcaaccgcaaccttccgcccactatctgctgctgggaaaacgtataaatttgaaaaatatgcgtgacaaataatttgccatgccaaaaattggcatttctgcaagcagcggcagtattggctcgaagctaataaaagtcttcaaagcgaacgcataaaattaaatacaaatttcacgcagcctccccaaaacgacagactccagctgctgtgcgtgatttccgcccggcgatgtcgcccatgtacgcgccattaaataatttccgccctcgccgccgccaaaacataaaaaagtccaaaaatgaaaaataaaaaaaaatgcgtgaggaaaatgttcttcagtcaagttcagagtaaagtcacgcgccgctgaatgcatttcacaaatcaactagaaatattgccacgaaaatctcgccggatcgaatctcaatctggaatcgagaaacgctgttcgccgaggcactctccagtgatttctctaaaaaggttcgaagttattatgcataagatgaggccattaaaactggctgctgttgcgggcccaaacttttggctgccatcgtcttcacataattagggtacatagcggtacttattatgggtgttaacggtttcgcagcgccatagccggcagatcaaaacccattcgcaatcccaaaacagaaaacagaagaaaccaaacagcccgaaaaacccgcctgtcaactcagcgagcttggtcagagctggtggagctttaatttaaaacagaaaataaacgtctgtcaccccggctgcttttaacacaaaactacggacgccaagagcattcacaacaaaaatagaggcaaaagccaaaaatttgtatttaaaattatgcacaacacttaaaaatcaacgcgcttatttatttcactgtgtcgttttcaatcgatggatcagtctgacggcgaaaacgtcgccaaactagtttttatgaaaatttcgaaaatgccagggctccgttgctggaaacctaatgctcataaatccactgggagttggggtatattagctgttgcaatctatctcaatggtttggcctatacaaccgtcgtaaaagtttccattcgatttgatggaaagtgaaaatgcgcgcagaacagttagtttgtcgtaggtctgttgggaattgttataagaaaagttctactgacctcggccaataagaattgataagattttttaggttaacaatttcgtataccttaccttaattccgcaaaggaaataaaataaatatatttaatttataacttgcgtgctagccaatcaggatccctgatgtcatatataagcctgactttcgctgcgattaggcttatcgatctcggtgcgccctcatgtctgaacgcctctggcccaaaacagacctccccggaaagggattggaaatccctggccgcatccaagccgcagaattcaatggaaagcgacaggcagtctggctacagtccgcccagctaatcttatcgccgctgacgatgcaactgtcgataagagatcgccaaatcaaacgaaccgcaaacggaggatccttcgatccggagcaggatcgagtgcacagtagtccgcaagcaatgattacccatgcacagtgcgtcctttgtctactaaatcgaataccgcaaaaaaacacacagggatcagaggagaagtggagataagaatcgaaattgtaaaatggtacgtaaaaatgcgaggattcatagttcccagaaaggccctggaccaacccccttccaccaggatttcaggacttcaggacatcgggacaggacctaccctcccagctctgaaatactcctacgcatcagcctctgcctgttacatcctgtgtgcaaaggtggcaaaaactcggagctacctgcggagcatcggcgtaaaatgtgtccctcgtcctgggtctcggtaaagatttattatcctatacatttcatgaatgcgatatgcgagtgagccggcaactgtatctgcatctg
PCR verification status
Line verified as correct.