| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT44757 | chr3R 16368758–16370878 (2120 bp) | Stat92E, MtnD |
      active |
yolk, lateral epidermis primordium subset, procephalic ectoderm AISN | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | yolk | 4 |
| 4-6 | procephalic ectoderm AISN | 3 |
| 4-6 | amnioserosa AISN | 3 |
| 4-6 | anterior endoderm AISN | 3 |
| 7-8 | anterior endoderm anlage | 3 |
| 7-8 | mesectoderm anlage | 3 |
| 9-10 | mesectoderm anlage | 3 |
| 11-12 | lateral epidermis primordium subset | 4 |
| 11-12 | tracheal system primordium broad | 3 |
| 11-12 | ventral midline | 2 |
| 11-12 | ventral epidermis primordium broad | 2 |
| 11-12 | dorsal epidermis primordium broad | 2 |
| 11-12 | lateral epidermis primordium broad | 2 |
| 13-14 | lateral epidermis subset | 3 |
| 13-14 | tracheal system subset | 3 |
| 13-14 | anterior spiracle | 3 |
| 15-16 | tracheal system subset | 2 |
| 15-16 | anterior spiracle | 2 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0016917 | Stat92E | overlapping | BDGP FlyBase iFly |
| FBgn0053192 | MtnD | 7736bp downstream | BDGP FlyBase |
| FBgn0262146 | MtnE | 8333bp downstream | BDGP FlyBase |
| FBgn0067783 | att-ORFA | 9349bp upstream | BDGP FlyBase |
| FBgn0067782 | att-ORFB | 9599bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
gattcttagccaagtccgcaccaccggcgacaattccttgtcgtcgaaacgtgaccgtaaatgagcggtaatccagacgcagggtccagactctcaaacccgaaagccaaactgaaagccaaacccgaaccgaaacgtgtttgcttttgtggtcgatacgctaatttctgtagttacccggaaaaaaggccagcgcgacgctcacgtagcaaatatgaatggcccaagaaaacgaagaagttgaaagagtggtgtaaacaaggcaaaccagtccaccagtccacttccaggcgactccagaccaggcaacaaaattagataaggatctaatggccgaaacaagcccgaaaatgcagcccaagcgaagggactttagggatggaggaggtggatgatcaaaacaggtcgcaccgatacctgacccccaggaaccgcattcgagttcggatgtgcggctcactaggtacgagagtcagggagtcagtcagcttaggtagacggaaccaatgcgactgtgcggtgtgtggtggtaaaaggtagtttggattcgcccgcaggcaggtttctttctattcataagtcagtgctgctggctgctctttctttttgtgcccttcggcatttttagtccacagtaaagtggttcaaggttctggtttgcttcggatgcctctaatgtgccaagtcagctggaataaactcagtcaagttggcaaaaatagttttttgtttattcttattaggagtaccgtcgaattgcggccttagaagtacttttccattagttatcagcgtgaaaagctgaaaaaaatactagagacacacaattgcatccgaggtgagacacccgcaacgagggttatcgatggaaaagcttcgaacgaaacaaaagtaaagcctcgatctggctgatgttttgatttctcgtatcgattagccggttttatggggaactgttcctgatctcacttgggttatctgagtcgagcagtggctgtcaggtggctgtgagcagactgtttacaaacaatttgctatgcgatagccaatcgccgtattgacacaatggggagagatcgtatttctatcagagcaataacaaatcacgacaattaatggttataagtgaagttatgaattgtctacaggtgtttaccgatcgattgaatgagctcaactaagggtttggttaatttgactgcccgcttttatacccgaaacttttcacttgataaggcgcaaacgtgaatgacaaagtaagtatggccaaccattaagaatgatatgaaaatttcgctgaagtagttcgaataatcagtgtttgctggaaatttgccatattcatatattattaccatgctctgatagcgcattgaccaaaaggcatcgatgaatcaattgccatgaaagattgcgtatggattaggtggaaaacctaaccaggcacttatcggtcaatttactaacttcaaatagccctcaacggcttcgcggaaaagcgactggagttttcgtttattaggaactgcgaaactattgaccgccgtttgcgaaaaatgcctttgtccacaaagatatcattatgaaattcggttaatggaattattatgttaatttacgcacatcgcctcttcgagggccacaaatgatgaaacgccggtgtatattatcaaggaaataaccaaccacaccccataattagagccaaaaatgcatggatggatgactgggtggccaccgcctctctcggggggctctatatcgctatagtttttggccatgtgctgtcttttgggaccaaatcgacatgacaacctaaagtatataggcgtccaatctaagccaaactaagagcatttcaagtcagaagtgcatttttatacaacttagtaactaacaacttattgatatcgagtcaaatccttttttggttttgaatgtgttttgattctgtactgatgatgctcccaagaaatccagttttctttccgctagccgccgcacgagcagcaaacgctgaatgaaaacaaaaacaaaggctaaacaaaccaagcaaaaacccagacgcgataaaaaagttttgcggcatttttaagtttcgctattgactgcgctgaaagc
PCR verification status
Line verified as correct.