| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT44976 | chr3R 16776112–16778334 (2222 bp) | Atpalpha, CG31191 |
      active |
procephalic ectoderm AISN, posterior endoderm anlage, procephalic ectoderm anlage | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | posterior endoderm AISN | 2 |
| 4-6 | procephalic ectoderm AISN | 4 |
| 7-8 | posterior endoderm anlage | 3 |
| 7-8 | procephalic ectoderm anlage | 3 |
| 9-10 | brain anlage subset | 2 |
| 11-12 | brain primordium subset | 2 |
| 11-12 | posterior midgut primordium | 1 |
| 11-12 | anterior ventral nerve cord primordium subset | 2 |
| 13-14 | ventral nerve cord subset | 2 |
| 13-14 | brain subset | 2 |
| 15-16 | ventral nerve cord subset | 3 |
| 15-16 | brain subset | 3 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0002921 | Atpalpha | overlapping | BDGP FlyBase |
| FBgn0051191 | CG31191 | 4861bp downstream | BDGP FlyBase |
| FBgn0038842 | CG5630 | 21178bp downstream | BDGP FlyBase |
| FBgn0013995 | Calx | 27793bp upstream | BDGP FlyBase |
| FBgn0263400 | CG43446 | 36114bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
gcatttcccaacggattttcaagggcaaattctgatgataatattgttggtgtagaatacaacgttgcataattattataattcaatctgccggactacgacatcttatatcttaacccagtgtgctcagtggaaattctattatgatttcacgcacaaatccgcgtaaagctgagttatgtacgagtatatctcacatccccccaccagcgttgtggcttcgttttgtatgctgactcatgcgctttcaattgaagtcaatttaagaaagcacatcaaaaatcatgaaactacaatctgacgatgctctaagaacgcgataatgaagttcccttcctctcaatgtgcgttccataagtaaatgatttggaattaagggccagccaaaacgagaactagttggtatatgtatgtatgtatgcatctacccgtttatcagtcgaaaaatgcagataaagcaattaagagtttatggagaggacggcaaataagctgaataatgtgcttccaacgtggtaatggcaggttctaaatgctaacacccaggatttgaatactatcagcagttatcagcgttgacatgtagtacacacacctatactatatattaaccagatattttgtgcacccgaatagacgggccccttccctttttgaccagttttacccggctcggagattttaggttcgcgttaactacttaacagattgccgatggcagtaaaagcgacagtgataataattacaactggaaaataccagaaaaccgtccgacagaggtggtgacttgctttcggcaatcaaagcgtggcagcaaaacaatattggccgttttaattcaattacgcgccaataaaaatctaatcaactgacaatggcaaaccgtttgaatagatcttgttggaaaaagccatctacgctatgtgggcatcatcaattggcggccataatcgcaagatgtggaaattatcacctcgcccattgactgtttgctgtcacatccagcacacagattgcattcgacaaggacttcgatttgtttcgctgcggtgtgatatttggcacatgcccagtttgcgtcaatgggtagggtcttaattactaacgattgcataacccgctattaggggtctgggcctccagtttcccaggtatcggtatctgtatctgtgcctttgcgctatatttacctttcgtctgcttatcagataacactcgctcgaccaacacttgtagattaagttctagagcggtacgttgatttattttcgttttcgtttgttttcgagttggtctccagcttgtaggtctctcaaggtccatcgatcattacccttcaggggtggcttagttccgaaggggtagtttattgtccagctacctgaagtagctgagccggagctcaacaatggctcaattgttcctgttcgccaccggttcaaacgagtttcgggcggtaagacgagatttgtgaatctccagaactctgaactcgtcttgtgtcacgcacttaatattgtctgaacgacaacaattaccgcaattaccgcgaacgcattgtgggaggaagtaaacgagctgggtcgagattaagccggctccactgggcaatctgtaatgcatagctaaggaaatgacataactttcgaatattactcggattcaattggccggtaaaatgggaaggcataacaaatgaataaacacaaaaaacagcgggcgatccaactattctagatcgagtaaataaatatataacccgcaagaactcgctaaaatcggatttggctgccacttgtccgtgggatttcttttggcactggagatccataaaaaaatagctacatatacctgcctgccataaatgttaaaatcttggcatttcgaaacgaaaatggaatggaaaatgttttccaaatgatgcaaacaattgaaagattgttcgaattctcgcagaagatacatacagttgtatatgtagctcaattgtgtgtgaatctgtgcctgtatcttttgattcgcactttgcttgttgcccgacgctccttaaatcgtcataataaatttttatttaatttaatgcctcatatgtgacgacaatatcagcaattgccgccacttgcacacaaactcggcctgtccgtaatttgttttaatttaaatacaatttaatacgcgctgctgacgttgccataaagctacttttgcagtcacgatcgcaca
PCR verification status
Line verified as correct.