Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT45101 chr3R 17019268–17021344 (2076 bp) SNF4Agamma, CG5862 activityactivityactivityactivityactivityactivity
weak
posterior endoderm AISN, posterior endoderm anlage, amnioserosa VDRC

Annotations

stageannotation termintensity
4-6posterior endoderm AISN1
7-8posterior endoderm anlage1
9-10not active0
11-12not active0
13-14amnioserosa1
13-14posterior hindgut1
15-16not active0

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0264357SNF4Agammaoverlapping BDGP FlyBase
FBgn0038868CG586221533bp upstream BDGP FlyBase
FBgn0264706CR4397523274bp upstream BDGP FlyBase
FBgn0038869CG335323722bp upstream BDGP FlyBase
FBgn0260004Snmp125342bp downstream BDGP FlyBase iFly

UCSC snapshot

UCSC snapshot

Sequence

gcacgattgactgaccgtttcgctcgcccacaatatcccgcgacacaagatcagatctggatagggattgaccttggccgaccctccagggggaggtgactaatcgaacagctttcgattggcatcgggacaggaacatcggttggtcaacagcaaatgctcaaaattcgcgtcgccttgagtgggtaaacaactggcaggtctccacccccccaaaatgtatctatacatgcacgcggcgaatgtatctgcagttgcaatatagtttatatttaccgagtgcacacagtgggtttttgtactcaaatctacgtacgtccgatgtgcagccaagactttgctgcgcccgttgataacaaaacaagaataacaattcacttgtttgttcatcgtttgcaccgctagatatgcacacactcgatatgatatataaacacactcatttggatatacatatacacacagtcgattgcaaatatatggacggcaatagtgtacacacgtactatgtaaatccaagtgtactttcctacagtcaacaaattaattcgctgtaagatctgttgagaacctgtgagcaattaataatgttttgctgaggaggctttgcgggccgagaggatgataattgttaattttgctaattgagatttttatgttttcacatgcggaagtagtaaacttttttatttgccaaatcgaggttcaacgagttgacaggagtgctaaaaaaaacagtaggactattaaataatactaaactacttgggaatgctaaacgctgtgagtgtggactattatgcacacaggatacacaggatacacaatcgtgcctattaatttatgcttttcatttgagttgcgtgcgcgcttggcattttcctgccagccaggctggatttttcatttagcctgacatttccattttccattcactgtcctcccgacagtctgtctgtttgccgtattccacccattattattcttgccattgtccttgactgcaaagagaaaaaaaaagcagaatgtgctgtaatcttcgttgttttcccggcctctgcaatctttgtgccgcatcttggccagatgccaaatgctaagttcaatagccacaacacaggctcataaaagccaattagcaccgccgcacaacctgccaaatttcgataccgcgacttgtgcctgctcgcttgtatgattttccgagccttcattccatttccattgacgtcagcaagtgagtgggagctaataaaaaaaaaaccatcgcactggaggccggcaaagtgcggaagcgggaatggtctgaaagtcttagaagataacaacaatcttacaacttgacatttccatcagttggccaagcaataattagaaacaataattgcctagcgatacgcaaacttgtatattttaagcaaatggtttagaaatagcccataaccattaatctacattaattttaagcatataatcagaagtattcacctaaaggaaatgaaaaattacaatttgttcaaattgttttgtttgttggccgtataggctcttcccccaatttattctttgcttctttaagttctgttttctttccacttctctttgccaccagtttcgtggcctatttgataaatcgccttctggtgacgcaagcccaaagaagtcaacttcgcggcgcgtgaatctcatttgttatgatccttgaaagcccaaaatgacgcaaaagaaagtacagcagaagatagcaaagtaataagtatatatgtatataaattggtctgatagagctccacacacatatgcacatattcgcattcgatgggcaacagtcaatgccagcgctggggttaaagatcaccagatagtacggattcaattgcgcggaaaacccaagcccaagtcgagcccctgccgttggcccccacttccacttgccactttccgcctgctgagggggccacttcaccggttggttatgcaaagagctgaaatgtgaatcagatgtccgactccattagaacggcaaacagaaagtcagctagctgaaataaaacaacaactaacggcggtgcactca

PCR verification status

Line verified as correct.

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