Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT45106 chr3R 17029068–17031318 (2250 bp) SNF4Agamma, CG5862 activityactivityactivityactivityactivityactivity
active
midgut broad, ubiquitous VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10not active0
11-12not active0
13-14midgut broad2
13-14ubiquitous2
15-16midgut broad2
15-16ubiquitous2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0264357SNF4Agammaoverlapping BDGP FlyBase
FBgn0038868CG586211733bp upstream BDGP FlyBase
FBgn0264706CR4397513474bp upstream BDGP FlyBase
FBgn0038869CG335313922bp upstream BDGP FlyBase
FBgn0038870Oga15731bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

tgcatacttagaggttttcgcactttacactcaatgtagactacatgtagagtaccacgcggcttattaaaagtacttattacgtatacgacgtgagcaactagggatagtcacttacatatgaaattttagcgagattggtgaaactatttcaaataggtgagtcactttatattaaaatcaagaagtcatgctgatagctagttgacttctctgatggttttgtcatcaactttgaattagtcggagaattacctttctctggggtttcgctcacacctacatatgtatatgtaaaacccaaggcctcataatgggcctaatgaccattataaacagttattatattgttaccgtctgttattgtttacttcgccgtccacaacgtggtcacccatgaaaactggtttatatcgatagatttgaatcatgtgtcaagtgtttgttgttatactatgcacattcatgggaattctttgcgaacttttctgtattctgacgtcagcggattgggctttcaccattaaattctttttggtatttgtttgttgttggtatgtgcccgctaatgatgatgattaattagccaactactcttcacatgtcaggcttttctcactgttcttcgcttcctctctgtctctctctatttctaatttctctttagcaaggccacaatcttgcattaccgtttgcctaacttatcgctcaaagaaaacaacaaatgtacacagaagctctttactttgtcgatgcgtatttaaactgtgtctcttcactcttgaattgagtggattcgcctttgagtcgagtacccttgccgcttcttcttcttcttccgcctgcagtggccttcttggtcatttcgattgtgggtgcaagtgggtctctctcgttgtcttctctcttgtttactcaagcgatataacgattaagtcgaaaaagaaataaacgagacccattcttctgataccctttctgcatacgggattcataatttccactcggttgcgatctctctctttgtctctctcttgggtaagaagaaaacagcctacagcagggagacagctgaaagataagcaaagcaaatgaggtgaaccgttggacaaaccaaaagtttattttcgatgcagtcaacccagatttttactgcactcgaaataattattgaatcgtacttctcagatttttgcaatataagctaaaacatttttataagaccagcaacactcaggatgacgacatctaatcaatcaattgtggcaacaattgaatacagaaagtattatttgttttattcactgttgttaaacgtgtaatatcatcagaatgtgtgatttattgcgattattttgtgaagtgtaagtgcattctagggtcttgtagcttcgttacaagtatatttacattgtgtggcgtgtgtgttcttgtatttgcctatactctagcactctcgcgcacttttggcgctctcctaggccaatccgctcgctctttttctcctctgctctttgtcgtggtgcgatcatgtgtggggtccggctggcgctcgctaaactcttaaccagtggctttttaaccagtttaagtttacatttgcgtgagcgcagacgtgtccggaaagcgaacggaagacaagtggaacggaacacggccgtataatcagaaatcaaacagagtagtggtgtcgtcacttttgcgactctccataaaaatccgtctgccagtgcttgttgcttcttcttgagtgcgcggttttcatgtatcgccgccggtattccgccttcgagcccagcacaccccgcgtgggagtgctaccctctccaccgcctcaatatgccaaccctcccgccgacactgccgccccgaaaacgccacccaagctgagcgtacactttgaccccaatttgccgaaagacaacgatagcaacaacaacctcaccggcagcgaaaatgcaaatgctaaaggcggcggtcgcaaggcgcgttcactaagcaattcgccactgtatcaccgaaaaaagcggtacggccatctgccggcgctgatgtcgaataacgggccgacggccagcagcaactaccagctgctgaacagtgcgaatctgcgagatctcatcgacggccaacgccactcgcatcacgtaagcaggcgcgatgacagccaaagccacagtcatagcgaaagcccaagtcacattggccacattagccaaagcaaccaaagcataccaagcctcccaagcct

PCR verification status

Line verified as correct.

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