| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT45323 | chr3R 17455727–17457827 (2100 bp) | E2f, mir-11 |
      active |
anterior endoderm anlage, midgut interstitial cell, midgut subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | procephalic ectoderm AISN | 2 |
| 7-8 | procephalic ectoderm anlage | 2 |
| 7-8 | anterior endoderm anlage | 3 |
| 9-10 | anterior endoderm anlage | 3 |
| 11-12 | brain primordium broad | 1 |
| 11-12 | ventral nerve cord primordium broad | 2 |
| 11-12 | posterior midgut primordium | 2 |
| 11-12 | interstitial cells primordium | 2 |
| 13-14 | brain broad | 2 |
| 13-14 | ventral nerve cord broad | 2 |
| 13-14 | midgut interstitial cell | 3 |
| 13-14 | midgut subset | 3 |
| 15-16 | midgut chamber | 3 |
| 15-16 | brain broad | 2 |
| 15-16 | ventral nerve cord broad | 2 |
| 15-16 | midgut interstitial cell | 3 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0011766 | E2f | overlapping | BDGP FlyBase iFly |
| FBgn0262434 | mir-11 | 7435bp downstream | BDGP FlyBase |
| FBgn0262405 | mir-998 | 7985bp downstream | BDGP FlyBase |
| FBgn0013984 | InR | 10685bp downstream | BDGP FlyBase iFly |
| FBgn0264826 | CR44034 | 14266bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
caagcgactcagggcacgcaatgcgacttttgatagcgctgccgcctcccctcccttcaccttttcactgccactactctgctctcacgttctccgtgttaatttcgaattagtatagcaacaataaccggccgcaaggtgtagtgaagattgttaaattaacggatctttactctttataacttaaatttagtctgcccccgaataataaatatgcccaattgcagacatgaaatctcaattcactaattaataaaatattagctaaaatcccaattcgaatgcaactaatggctggtatttaatttgcagccataactgtattcctctggcatgccaatttaccgttattaattatgaagatcatgcatttacatggctattaattatatacgttgttatgtatgcagactcacgcacacacaggcataagcacaagcacacgaaaacatacatatgtatgtacatgcatgctcactaacacccacacagataccaagagctaataaaaagtttcgctttctttttgcacatcattttgcatgcgcagtaaaaaggcagggacaagtgaaataaatacaaataaataatgtgcgagtgtgcaaggtgttaagcaacaacaattgcaatagagggaaaaaagtgaatcaaaagccagaaaaagaggaagaacacgaattttgtgtattaagcggcagtccagagagagaaagagagagtctcccacggtgtgtgtgtgtgttggagggggatgctgctagggaaaagagactgagagtaaaagccggcctgaatccgaataacagctgttactcacagacacaatccacatggaacatctctcttcatctttttgttgttgttggtcccatggatgcttttttctagccggttttattttctctatcatctttatttcatttggtcaattacacacacttggcttctttcttatgaaccgcaaggaccgagacagaaggcagccacttaattgcacacttacagaaatgaaataaggtaatagtaatataaaataaaacggctgtaagcctcgccttagcttttttcgtttgagaaagccaaaaataattgccaactggccaagtcaagaaaaagagaacgagtaaaagagaaggcggctttttgtccagggagaggcgcacaaaatgcgtcgcaaaatatttcgcccacagaaaactgcaaacataatgaaagcccgggaaaggaaaaattattgcgtgggtgtggaatatcaatgccggcaaggaaagcagaatgaattccagggaagtcccctttgcgtttcatacaccaaaattttgtacataatgtacaaaacttcatttcgcctggccatttacgcgatgacgcatttagagccaatcgaatattgtgtactcacaaggcctgataacaggggccacacataatgtacacactatgtggtgcagtcgtcaagtacatgcacagattaaagcggaaaactgttgatgcaagtccaattaacccgacgaaactggtagaagtaaccggcaaattcaagaccacagaaaatattaaagagacaaatgatctgagattttaaaacatttagatcactttaatttgtaaaacaaacacattacctaattattacatgtctattgaacatttcagttgatatttatgactgcagtgcagctttaattttgcattcctcagtatccacgtcaacacaaaaacgccagttagttggctaatattgtgctggacggttttacacaattaattttaacttgaaatgtatttttgtccatatcttcgaagaaaaaccacgagttcttcaaactgttacctgcactgttgtcttaacatctagtaaaatgttaatctggggggcgccataaagaaatcgccgccgactttgggcaaatagaaataaaaactgatggactccgaattttcgattcgttatctctgaaaactggagcgttgggggattgaatgagtgagcgaatgactgctattcaccgtatcggttttggaggttattagagggcttagcccaaaattgaatgattaattgatcatcaaaggtgaggtggaaactccctttgcttct
PCR verification status
Line verified as correct.