| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT45591 | chr3R 17959570–17961726 (2156 bp) | SKIP, CG42390 |
      active |
A-P stripes, procephalic ectoderm AISN, anterior endoderm AISN | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | ubiquitous | 3 |
| 4-6 | A-P stripes | 4 |
| 4-6 | procephalic ectoderm AISN | 4 |
| 4-6 | anterior endoderm AISN | 4 |
| 4-6 | posterior | 4 |
| 7-8 | ventral ectoderm anlage | 4 |
| 7-8 | posterior endoderm anlage | 4 |
| 7-8 | procephalic ectoderm anlage | 4 |
| 7-8 | anterior endoderm anlage | 4 |
| 9-10 | ubiquitous | 4 |
| 11-12 | brain primordium broad | 4 |
| 11-12 | ventral nerve cord primordium broad | 4 |
| 13-14 | brain broad | 4 |
| 13-14 | ventral nerve cord broad | 4 |
| 15-16 | ventral nerve cord subset | 3 |
| 15-16 | brain broad | 3 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0051163 | SKIP | overlapping | BDGP FlyBase |
| FBgn0259736 | CG42390 | 482bp downstream | BDGP FlyBase |
| FBgn0051423 | Ir94c | 14395bp downstream | BDGP FlyBase |
| FBgn0051424 | Ir94b | 16600bp downstream | BDGP FlyBase |
| FBgn0051164 | Ir94a | 18635bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
aatgttcgagatccggtcgttttgaaaaccagctcgagcggtctattcgcgtgaaattgaaactgaaaaagccggtaaaactgaagcaagtgtgttgtgattgagaattgagcgaaacgaaaacggtggccaaacgagccgtttaataagcaaacaggctggccaataaccaattaccatcagccatgccatcaaggaatcgtgataacgcagacacaaccggcagcaatttgttaatttgaaacgtcgtgtgtgttcctctacgaaaaaaaaaacccagttatttagcaagcatttaaattgcatttgtagcatagcactttagttgcgcgtaggaggaacagcaaggtcgttggggtcgaatgtgaatgtttgtgatgcaagtgacaaaatcaaaattggagtaaattggtagccattcctgtgagcattttcgcgtcgcgtaacggtaaatcattgcgccctgcgtgtcttcgtgtgcgtgcgtgtttgagtgtacgtttttcggttttgttttcatctcctccttgccatcctcctttcttccaccttcaattgccatctcctaatttcctctacgaacggagaaacacgaaaacgaaaagtaagtgccgctacttctattcctcctatatgtgttattgtaaaagatttgcagccatgtgtgcctgtgtgtgcttttgtgtgtgtgagggagatttcgtgagtgcgatagtgtgtgtgtgcagcctccaccaagcgccgcatttaaaggatattcctaatccgttttattgattgcagggcagaaaggagcggcgaaaaaacagcaacaacaacaactacacagctggagtgctcaaactgtgtgtgtgcctgtgtttagttcttgttctcggcaatctgtgccgcttttttttatgtttttattcccttcccatttccactctatcctcatcctccggggttgctgttgttgttgttgtcggtgatttagtagtgcctgctgttttcgtttcatctctgtctccctcttatttccctctaattctgactcttggccggctttttgttgttgctgcccacagatttcctgacaaatgttaattatttatgcaacacttcctctctgcattttgttatacaattgtccatttttcactcatttggtttaaattgtataaacacttccttaatgtcttgaaaacttcctttttgagatagaatgactcataaagtcacatatttcacttaaaaagtgcgtatcttctttcgaattgaaagttcttgtgcaaaattacaacacgcatttaacccactgatataaattctttaattgaaaattatgcagaatcacataatatgaaatattcaaagacatattgaaagttcgacataatgatttatcgaactcaattaatttctgtctcgagcaataattaaacgtcaattaaaaaaacattgattacttgtgtgctttcaacattttgagacttgaaatgttttttaaacacctgtcgtggccgtgtccaaataaaaccctaaactgccgactttagacaccgaagaggattgtcatttaaaatcacacaaccacaccttcttttaccttgtctcttattttttttgtgcctgcttgtttgggtagcttatctgtgcttataatacgtgtacattttcgctgcgttccatatctcggtgaataacttcatcagaaaattaagcgaaatatgcctggcacctgcccccgtgggcataactcaataatcacatcaaatgtcgccactggacttgcagtgccgtgctccctacgccttccccctccagatgcccacttcctggagcagcggtcgcaacacctccttaagaggtgtgtccactggtctccctggtctcgctggtctcctctcaactcccagatcttggctgcccagccttaccagctctccccagctaatgccgcacagctgcgcgccatttaagtcgctgacaagtgttttgccggcatctccggaatgcgacggatacggtggcgaggtggagagccgagaaagaatcgcctgcttccatggttcctgctgccacagaagccgcagcaaaaagtggcagccaacattgctaccaattatgcgataagcgagaggagcactcttcacagctccacagactcacagctga
PCR verification status
Line verified as correct.