| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT45597 | chr3R 17970065–17972204 (2139 bp) | SKIP, CG42390 |
      active |
posterior midgut primordium, midgut subset, posterior endoderm AISN | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | posterior endoderm AISN | 3 |
| 4-6 | hindgut AISN | 3 |
| 7-8 | posterior endoderm anlage | 3 |
| 9-10 | posterior midgut anlage | 3 |
| 11-12 | hindgut proper primordium | 3 |
| 11-12 | anterior midgut primordium | 3 |
| 11-12 | posterior midgut primordium | 4 |
| 13-14 | hindgut | 3 |
| 13-14 | anal pad | 2 |
| 13-14 | midgut subset | 4 |
| 15-16 | head subset | 3 |
| 15-16 | telson subset | 3 |
| 15-16 | midgut broad | 2 |
| 15-16 | hindgut | 3 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0051163 | SKIP | overlapping | BDGP FlyBase |
| FBgn0259736 | CG42390 | 10977bp downstream | BDGP FlyBase |
| FBgn0051423 | Ir94c | 24890bp downstream | BDGP FlyBase |
| FBgn0051424 | Ir94b | 27095bp downstream | BDGP FlyBase |
| FBgn0051164 | Ir94a | 29130bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
actgacacctggcgaaagaattggccaaaaaatgcatgacaatgtaaattaattaaaatatttataagcttgtacctcactgcgagtggatgtggtgcagctaattgataattaaatgagaagcggggggtgggaaaaaataactaaaatatttaaagattactacaattttggatgatgggtcaatataaacattagcatgtaaagcaaaaaaaaaacaaaaaaaaaacattagttaccacactaggcaaaacttgccatttagctctgggcttcattagtttaacctctaaaattgtttattatttatgactttcattaggcttaactgctatcctcttttttcaacatttacaagcatttaagcattaaataaaaaaacaactaacataacaaacggataaagctttgtttacattacgaaattcatgttagatttattgggtttttcgtttttatgtcattattgctgctgggatggtctataatttatttaatgatgcttttaatgtggctcgattggagtttttgttttgtttggtcgacactcattttcgcgtggccataataatggtgtttagtggggctttgggctatttgcattgcattttacccaccatatgcataatgagtttaattgtcggtccgttacttaattgaatacattaataacaaaagcaccgatcgcgctccacaacaatgtgtgtgcttatgtggattacacaggccgaacaactcttgacatttaagccccgttttcgagtcaaattaaaagcaaataaaaatccggcgacagcgacgacggaccgaccaggaaaaccacgttgttgtgacttcacatacatggctaagagtcagcgatttagatagcaataaaatgcagctcacctcactgaactgcacatgctccattaccaattcagaaatctttaggccgtgcggctagagagcaatggggaagcatgttgcaacaaccacgtcaacaacattagaggagtcacgaactgcggcaggaacacgctgcagcagcgacagtgcaacagtgcaaccgcagcagcgagagcaatatcaaaagcaaaagcaacatcggcaggagcagcagcagcagcagctaaattgtaaacataaacaaaacatttatgactatttacagttgagcccaagacttgcactccaactaccatcggtttccatttttttctttctgttttttttttttcagggcgggggtctcttgtacgtgagcaatatttctagttgttgttgttgctgccgtagatgttgctgatgaagttcaatgagttttcgggtgtgaaagggtcaattgtgtaaatagaaacggaaaactgtgaacagcaaacacatagctacatacaacaacagcggcagaagcaactgaaatcgaacatcgaaaatgtagaaggggaaaatgcagggaaagcaacggggtcgaaagaactcataaaaatatcacacgcatataggaaaagcatttgcgataagcattgcactatgcaaacaatcagggacaaatacaaacagacagcgagcacacacaaacggagcacctagaatgcaggtacagtgggcatacgcataattggatttggaaaaaaaactaaatgatcaaaaaatcaaatattaaaacttttattgaaggaaagtgaaattctgtatatcacgaatgatcctatgatcggttttcctaatttatccaatcaaaatctattagccactttgtcgcacttagcgggcaatcactgtttacagtaaggttcaattgccatcgaaaatgggagtgggggtggcaatagatatagaggggacattgggtttttatattgggccagacagaccgccgctttttttatgatgcaattaaacattgtgtttaatgcatttgtaaataataataaataaaaaacatttactacagcaatcacgataatgcagccaggggcatttcagttcggtggggcagcgataacgtgataatgaagttgaagtttcgaatgcctctcacatggcaagctgctttatttgcctacaggaaataaaattgccataaaaaccactccgcctccgtctcataaatgcatataaattatgacagtaaatacgatgatggtggagatggtgg
PCR verification status
Line verified as correct.