| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT45602 | chr3R 17978799–17980887 (2088 bp) | SKIP, CG42390 |
      active |
procephalic ectoderm AISN, hindgut AISN, anterior | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | procephalic ectoderm AISN | 4 |
| 4-6 | hindgut AISN | 3 |
| 4-6 | anterior | 3 |
| 4-6 | ventral ectoderm AISN | 3 |
| 7-8 | ventral ectoderm anlage | 3 |
| 7-8 | procephalic ectoderm anlage | 3 |
| 9-10 | ventral ectoderm anlage | 3 |
| 9-10 | brain anlage subset | 3 |
| 11-12 | ventral midline | 2 |
| 11-12 | brain primordium subset | 1 |
| 13-14 | ventral midline | 1 |
| 15-16 | ventral epidermis subset | 3 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0051163 | SKIP | overlapping | BDGP FlyBase |
| FBgn0259736 | CG42390 | 19711bp downstream | BDGP FlyBase |
| FBgn0051423 | Ir94c | 33624bp downstream | BDGP FlyBase |
| FBgn0051424 | Ir94b | 35829bp downstream | BDGP FlyBase |
| FBgn0051164 | Ir94a | 37864bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
gaaacctgttcatttcctggcgatttagaaagataattttccgtaccactttctaattactttgtgtcgcttcctcccactgcaaatcctcttcgattgctgcactttcgatgcccagttacctaagcaggtatttcgcattggctcaatgaagatacatgccttggcaatggacgcacactaccgcctttaatcccaaaaccaaaatcggagactggagggacaggacatgcctcctatctccatctgctggcataatgtgacacgtttcggggttgtttcctaatcccaaaacgaagcaaaggccagaacgcagagagtgggctcttgggctaggggaatgtgccacaacctgacactctggtgtcggagttgtgaaatcaggcagcaaaaattgctcggcttacctgagcagcagcagcagcagcagcagcatcaactcttcatatcccatatgtatccgtatccaagggatacagtcggagcagcagctgtaagatggacacacaaaaagacaattattcatgtatgcattggactataatgctctgctcagcttgaaactcacctgaatggcttgaatagcttgaatggccatgcagcatttcactttgcattatgtaaaacattttcacaggcgacaaacatttgcatgattaaccataattgaaaatccgaaagagacaacggcggtggcagtggcaactgctgccttcctggatccgtaagtccaatcagtagcgctccattcaactcaatttatctacgcatgccaggcagccaaccttcggatttcggatttctcagcacttcagctactcagcttctcaacaccccaactgccttgttcagtagtgagtcatttcagcttggtttagttcagccaacttgagtggagtcacctacggctgggtggagatttgcttttccgactttcggtgcatttttcccatttggagtccacgccctattcggctgccttgaaatgcgatgaggttggtctcattttctccggggtccactaaggttgactttcaaagcttgggctcgaaaatggttagaaagttgagagagcctatcgtcgtctaataattatatccgtaatttatggacgggccaaactcgaacttaataaagtaatttcgtaaatatttcacggtgctttgattaatttaataaatagtatttggtacctgattcgtttaacttaaaatacattgtttagaaatgaattaaatttggttttgcttgagtaagtaattgatattccgggcacctttaaagtatatttgcgtcgaaattattgatgtgaaactttttggaaaaaagaacccgtttcaaatggccatttcgtgcttttacttagaccgacagctttgacccataactgtaatttgaaactcattcataattgaatctcggtatgttgtgccgaggaaaatgcttcctgctcattaatgttgcagtaggcaagggtaaggagtggtattggaggcaaaggtaatcagtcaagtgcaactttttccaggtcttgcctcatttttagcccgatgaatgccagtggcttttgttctttggtggctaatggaaggcttcctgtttagacggggttttgttgctttaattagttgatcgcacgtgatagggccagcagcgcttctctacctttacctgtacatttacctgctaaccaactaagccactatctctcccgcttttgttgttatattagcacttgtccagctttaaattgcttgtaaagattatctatggaaaactcacactcaatttgcgctctccaacttcggcgtgcatatatgaggcagtaatctgtgcaaaatcttaagtagcttacaatgaggggcgttggttgtggcctggcccgaagacaatgcagattgcaattggtagggttgttcttgacggtgggagggggggggatggggtttggctaccaataccaccaactaactacacatatatcctacacttgaccgtccagcagacattctctatccttgtaagccaaaggatacataaattgcagatgtgcggagtccaaggagcggacagaaattgcttggcaaat
PCR verification status
Line verified as correct.