| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT45607 | chr3R 17987435–17989642 (2207 bp) | SKIP, CG42390 |
      active |
brain primordium subset, ventral nerve cord primordium subset, hindgut proper primordium | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | A-P stripe | 1 |
| 7-8 | posterior endoderm anlage | 3 |
| 9-10 | posterior endoderm anlage | 3 |
| 9-10 | brain anlage subset | 3 |
| 9-10 | ventral nerve cord anlage subset | 3 |
| 11-12 | brain primordium subset | 4 |
| 11-12 | ventral nerve cord primordium subset | 4 |
| 11-12 | hindgut proper primordium | 4 |
| 13-14 | ventral nerve cord subset | 3 |
| 13-14 | brain subset | 3 |
| 15-16 | ventral nerve cord subset | 3 |
| 15-16 | brain subset | 3 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0051163 | SKIP | overlapping | BDGP FlyBase |
| FBgn0259736 | CG42390 | 28347bp downstream | BDGP FlyBase |
| FBgn0051423 | Ir94c | 42260bp downstream | BDGP FlyBase |
| FBgn0051424 | Ir94b | 44465bp downstream | BDGP FlyBase |
| FBgn0051164 | Ir94a | 46500bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
cgcaatggtatgcgagtatgaaccaattaagagcacagcgcctccctcaatcagaaatgttatttggccgcaatagtcctaaatcaacaaggccataatccaaatatgtaccccaaaaaaggtcgcgaagtgttgacaacatcgaaatgttggttcaaactaaagtatttgtgtaaatattgtttggctgaaatttgatttctcgggttaatgctaattttcattctagcaaaatcagtaaataaacaaaacttaacaatggcaattgttgtattgcccgcttttcctcgcttttccggggaaaaatgcagcgccgcagaatcaaccaccgaaatggatggaaacatgttttcattagtcgaaattattagacggctagccgttcacccctcgaatgtgatttgattttccatattgttccaagcacgctctctatattccttcatatactatgccgctcgatccatctgtccagtcatcaatacttgtcgcacaaatcctttacaccatcgaacgtagcaccccagcgttctgggaagttcatttattttgtgtttaacagcatttagggattggaattttccacgcattgtcttatttgcacaccccgaaatccgggggttgctaaataatttatttcctttctgcccgttaatgcccttcaagtgttcgctgtggaaagcgtaaagtcctttttaggcctcctgatttgtccgtggattaatttgaccctgagccagaattttctctcttttgctggctcggatatttaatttatttgggtctgttttgtctaggaactgaccacgcaaaactttggccttcaaaaaatgttttcaaaatttatacgcaaccctcggctcaaaaaaaagtggaaaagaatgaaagaaatcagcgcgcaaaaccccaaaaagcaatttctatgcacaggcaacaacataaagtcaatttacagcacgagccctgaaagaaaaacacacagggaaaaaaaatatatatatataaaaaaagaaagggcaccgaaatccggggtcaaagtcaggctgccaataaatccgtaacgaatccttttgcgaacagcagcagcaagaacaggaaaggatctacgcttcagtgcatttttgatggacgtatccgagcgtagcatattgatggcaagttttgcgcattttacggatattgcacaatttctttttcattctttatttgggctgtgcactctcacttgccgaacaaaaaaaaaaaaaagattaattatacaggcaaaatgggcgtgattgaggcaaacgtttgtgcgaggacttttaattggcttttgagtcatcgactaataaagattaattgttttttaagagcaaaaatgttgacaatgccgccgggtgaaagggaagcgaaggcaaaaaagggccaatgcctagggaaggggcaaatgagtgtggagatgggaattattggtggagtttcaggggcaaaggacactcggatgcgtcggatgcccaggacatgccagtttatctatgtcagcacagtggtacgcactcaattggaagattaaatgcaagccaaacagtctgctcgcggtctggttcgagtgtgatctcttgagtacagtgcgttatgtggctataaggatacaggctacaagtgttattagatataatagatgttatgttaattacgttctttaattttggtttctacatagtacatatacatacgtataattcatggaatcattaggatttcaaaatgcatttaagaagtgtctaagaatgtcctacaaattttgtattcctggtattcactgagtaaattgcacacttaaagatggaatgaaatcactagatttcaaaccacacgctactcagggcattgtattttttggctaccatatacttacgctacgcactgtagctctttagtctgcgagcctgccacttgccaatgctgcactttttttttttgcgttttacttcagacaatgtgttattgtgttcccccgcttctcgatttcggttgcatatgcggtggtggctactgtggaccgtcgtccattggcaggtcgaacgtttcaaatgggccgctcgatgttgctgctgttgccctgtgctgctgctgcctcatccatttttgcgtatgaattgcaaaacgccgcacatatttcacgttattgtttggtggtgctcctctccgtctgtctgctcgtct
PCR verification status
Line verified as correct.