Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT45610 chr3R 17992797–17994908 (2111 bp) SKIP, CG42390 activityactivityactivityactivityactivityactivity
active
ventral nerve cord subset, brain subset, ventral nerve cord primordium subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10not active0
11-12ventral nerve cord primordium subset2
13-14ventral nerve cord subset3
13-14brain subset2
15-16ventral nerve cord subset1
15-16brain subset3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0051163SKIPoverlapping BDGP FlyBase
FBgn0259736CG4239033709bp downstream BDGP FlyBase
FBgn0038934Gld244749bp upstream BDGP FlyBase iFly
FBgn0051423Ir94c47622bp downstream BDGP FlyBase
FBgn0051424Ir94b49827bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

aaattgaaaattcattaatgcgttggtaaacaattgtgacaaagttggtggtggtaataataatatataaaaatttcaagaaaaattattttcatttatcatttcaacaattcatttttgaaatggcaaaaggatattaacaattaggcctgcggttaagtgtgaattcaactttatatttaaaaaaaattccatatcagcacaacataatggtcacttaaaataaatttcgaccaacaataagcttttccatacgataaaattgacttaaatcgatgtttacaaaaacttaaagtttccccatttggcaaccgcacacatgaaaataataatcattgtaattatagtcgaagccatagtaataatcataaaattgtgaaaaatattcagaccagtggacgagtaaattgccttgccaacttttgaccatttttccctccccactcattcccctccggcaatccttaacccttttccgcctgtctgccatacacaaattatgcctgcatttaagtaattgttgcaagcgatgacaacgctgctgttgcacgtcctccactgtctatctctaccactcgcattgacaacaaaaaaatacgcaaaaaatggaagagtgcatatagtgtgtaaatatgtacatacatataacatatagagttggaaagcaggaccaagcggaattcataaactgcagcgacgacaaattgatagggggcgggcaggaaagtggggtccagcgaatatgcacatcgtataaacttttatgaaacgccataaaaatatttataaaattgtcaccaagctacatgtttacgagcatttaaaaaatgatatttccaataatgcgaaaattatacagataaaaaagggaatacttaaactgattgcacaaacggaaattacacagatcgttgagatacggaacgtatggtattaagggtatttaatgagatttctttatagtaatgacaaagtaaagataaaaaatttgaaataaaatgaaattttattaaagattctcaatctttatatgaaacttctaatgtaacaacatttgtgaaaacatttaagagaagttcgcttcattgatttcgcccagcttttgacagttgaatgcatttttgatgctcatttccagggagtgaggatagtttgaacacatttatctgcagctccgaaatggcgtgagtgttgcacgtgtcactaacacagcaggcggtggtacaggatgtgcaaaatcaaaagaatatttcacacttgctgacccgaagcgattccatgcactcttagccccgtcgaatgaacgcacgcaattcgaaattgactaatccaaagagcattcctgacacttgccttcttacccacacacccaaccggcagaggttgccttcgtcactaatgacttggcacttttcgcaggacagcagcagcagcagtagcagcagcggcggcggtggcaaaatcatgaacagcaggcaacctgtgccacgcccttggctgtcaggcatttgtcatatttctgtcaaataagcgcttttaatattgatagctgccgcctgccactgtcaacaggatgttggcttcagcgcgttttcagcgttttcagttcgaaaagtgtggaggactcgaggttcggagcttgagagattcctccaatcccacggaatcagctcagtgcagctcgggacgcaatcaggcgttttatgtgagcagcttaatgtgaatttattgcatttcaggcagttgccacccgcttcctgctcttcgcccttacataatgagtctccatttatttccttttcatcttttcatttttgttttttttttatggaatatattttttttcttcgtttccctcctcttgagaagaaatcaataaatatgcaaacgtctctcgctgagctgccaaattttgattatgagggttaacgatttaacatttcatggggtcagcgtaatgatgaggatttatggatgccagtttgacttaactgtagcgccatttgtttgccgcactgaactaacaaataaagacaaaaatgtaacattatggaacattaaaaacattaacttgggacttttaaagttggtggggttttccaaggcacagtt

PCR verification status

Line verified as correct.

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