Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT45619 chr3R 18009304–18011399 (2095 bp) SKIP, Gld2 activityactivityactivityactivityactivityactivity
active
head subset, posterior midgut anlage, ventral epidermis subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10anterior midgut anlage1
9-10posterior midgut anlage2
11-12posterior midgut primordium1
13-14ventral epidermis subset2
15-16head subset3
15-16lateral epidermis subset2
15-16ventral epidermis subset2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0051163SKIPoverlapping BDGP FlyBase
FBgn0038934Gld228242bp upstream BDGP FlyBase iFly
FBgn0259736CG4239050216bp downstream BDGP FlyBase
FBgn0051423Ir94c64129bp downstream BDGP FlyBase
FBgn0051424Ir94b66334bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

gggctcctctttcggctgcttcttaaatccaatcctttgccaggccccttgatttgctcgataatattacgttttcattagcctgtccggctgcctgctggctgcttaattaattttagttgattgtgagacgcgtggcatctgtggagtgtccaataaccagccgaatttcgagcgccgaccgggaatcttatctcctgacgactcgcattctggcgattcgattcgtttcgcttcgctttgatgctcaggatgaagctcgctcatcaacgggttttcgcaagcatatcagttttcataattggcactgcccagagttgccggcggttgttgttgttgttgctgctttggctgcgcaaacatttcatgttcaagcttcccactcaagtggacatttgagcctccttttcggccgggtctctcatctgagctcatcggaggagacccgagacttcagttctggtccattgccatggcaatgtttatgttgttgcgttgtatctctgctgatatgtgcagcatcatcacctcatttagatatgcgatatgcaaacgctttggctacgctttacgactgccgtagcaaaagatacacggggcgaaaatttggaaccatatctgatttgtatatattacttagtttaaagtgtgaccttgcaatgttaagtacggggtttttatttagaatccttatgtatattttatttccttttgaaaaaacattttagagttaaaactccaaaaatagatgcattttttttttaaatatgtttttaccattgttaaccctttttttcgctgcatctgcatctgggtgtctgcttttttttttccatttacaactcggttgtcgttgaacttgaccctgaggctaagccaatgaagaacatgcgccttaaatgccagaaaccgactcggacacggacgcttcctttccagtctccagaatccagactccggttcccagttcgtgttccttggtgccaacgcattgcactcaatgaaatgaattggttgacattagtaagcagacgagtgttgttgcagttgcagctgaaattctaaacgggcagagggactggactcgaagaccatgaccaagaggtgtgagaagtggttgtgggtcttagctgcctttaaatggggtatatatgtcggattgtttaagcgaaaattgagatggagtcggatcgcttaggttgtgaatggtcaggccgataagatacgaaaattgaattggtctgctgtatgtgggaatgggtttcatgggaaggtgctaccacaaaatgctgggattaatcaaaataatgctaaaataaacagaatactgtaaatatcccacggatacaactactctgagcagtgtgtaagataacagatagcacatcaagtatgcagtcttgaagataatcgaaaataccattatgtaaagttagcttcgtgtaaatgtgttcccatatgtgttctatatacttaaaattcttcttttttgatgcacccacttgcaaagcaatttatttctatttaaatgctttgaaaattcctaacattattaaacgtttctcatttgcgatcgtttaatatgccatgaccgagttgggttcatcatgacaattaagcaacaattttcagacgtatgtatgaattcagttccatctgtcatggtctatcaaaagtgttgtcacttcacagctgtctgagctgctcaggcccaattcatatcaattttcatatagcatccaactgcagctccatttcccagatacattctcactgcctcgcaaaattcccaaacactccactcagcgccaactaatttcgcatgccctgccaccacgagtcgagcacttcaatcctcgtttccagaggcaagacaaaatgcataataatttcagcttcagtcccttttttccctagactccccctgattcccaacgattccatcctggctccatccataaaacacccaacacagactgagacgggactcaacccaattccataaagcgaaaatctcaatgagcgtgtgggggggggaggcatccatatccatatgctaaaaacgaattcgccgtggcgcacttgtctaaaatgac

PCR verification status

Line verified as correct.

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