| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT45799 | chr3R 18349010–18351207 (2197 bp) | CG5346, Octbeta1R |
      active |
amnioserosa, hindgut proper primordium, anal pad | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | not active | 0 |
| 11-12 | head subset | 1 |
| 11-12 | ventral epidermis primordium subset | 1 |
| 11-12 | hindgut proper primordium | 3 |
| 13-14 | head subset | 2 |
| 13-14 | trunk epidermis broad | 2 |
| 13-14 | amnioserosa | 4 |
| 13-14 | anal pad | 3 |
| 13-14 | telson broad | 2 |
| 15-16 | amnioserosa | 3 |
| 15-16 | hindgut | 3 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0038981 | CG5346 | overlapping | BDGP FlyBase |
| FBgn0038980 | Octbeta1R | 3211bp downstream | BDGP FlyBase |
| FBgn0053099 | CG33099 | 5632bp upstream | BDGP FlyBase |
| FBgn0053093 | CG33093 | 7406bp upstream | BDGP FlyBase |
| FBgn0038983 | CG5326 | 8886bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
cttgttttccgtgcgttttgcttccactttttatagcttagtcaatttctgctggcatgcaattcaattagtcggcaattgggatgcgagtcgcttttcaatttgccatttctcagctttcagccagctatgccagctagttgtcagtgctaacttgtctctaatttagctaattgagtcagtagattcagtcgacgaattcgatgaggaggccaagttggccgaagatcatctctatcgaatgccagaatttctcggcgtctcgatttgttttcccccatgttttattgtgttttcgatttgattggcgcttgccgaacaaatttatcgttgaaattgattggctttcatgcatttatggtcagacataaattgcgggcacgcgttaagcgtttctattgtttgtttttgacgccatttgatgttgtatgcttgtaatttaattgcataggcgaatgaactcttaaaacacttgaacaaattctaggactgtgctatgcaaaattcatttggaatgcggcgtaagaaacatatacgaaaatgtttaattgctttttccatcattggaatttccatatacgcatgcgggaaaaaccccttaagcataatccacaaatagattcaaattcaattcaatatttatagaccgatttcagctcgtatatatgtggcagtttagttgcggaattttcgctgagaaatatggtcgtgcagtataacttatttatagaaaactgaattgcggctattggaattggctgaaatgggcttaaatgggggaaaatggttgcagatgtcgggctaatggaaaaataatttcaatgccattgaaatatgcgcacagaagtcaacggcagaggtaattggccagaatagcattatcgcctgcgaatcaaacttggcatcaatgttttgaaggttgcaaaatttgcttggccagctgtcaatttgaattgtcaagagaacttaattcaatttctacccatcaaccaatgttcaggtggctttaacaaatttgtgaggtcaagagaaatccggcagccaatttctacgtatatttcgatggcgaaaacaggcaaaacgcgattgcggccattaagccacgtcagccaagcccagaatcaacaggtttaagccagtttcaatcggttgcggcaaaagtccaactacttaacatgctcgcactgtcgcctttcggtagtatcatcatcatcaaatcaaacaaggtgaggcccatcgatgatgacgccgtggagtgaatccccaaagcaccaaaacaagatgcgtcaccgagtggacaagttgcccaattggtaactggttactggttactggctaatgatcaccggcagtgtgtaaataaagctgcaaccagtaaacaaatattggttcgctcattgcgttcacaccaaaatcaggttccgtaactcgaataattgtaaacattttgatgcgtactgtttgagtttccgcacttgatgaagtgacattgggtcgatagaaattcaggcattccacaaatgccacaagcctgacttccaatatagttcaaaaacctcgcggagctcacaaaaaaacacaacaacaacaaaaaagcacaagtataaacaaaacaaggggaaagaaaaaaaaaatccaattgaagttccgttgacataaaaaatgccgcaaggcagcgatttaattgcttctagctagctgctttgggggtcaatggctctggtggggcgagaaggtcaagagagtgcttccaccaaggccaagccgcactgtactccaagcgaactcgaatctctgggtgagccctcggcgaaacctgcggcccgataagcaaacagtgcgtatgcgctacatttccatggcgtttcattaccgccagaagaagaaactgtgtcacgtatcggcaaagacccagttaacacaatgggcacggctcccaaaaaggcaaatggaaaatttttgtgtggccaaagaagggcagaagaaacggtgaggaacaaacaaagtcattaaatcttttggaacaaatttgaacccagatatctaaaaggttaaccaaagaagttcaaagtagtgtgggcaacacacaaacaatgtcaggaaactcagatatctaatattcttaggaatctcacagatactctaactcacagatacattttttaaagtcagcttgcatatagctgtgtaatgtgtaa
PCR verification status
Line verified as correct.