| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT45800 | chr3R 18350671–18352751 (2080 bp) | CG5346, CG33099 |
      active |
amnioserosa, telson subset, somatic muscle | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | not active | 0 |
| 11-12 | trunk mesoderm primordium | 2 |
| 13-14 | amnioserosa | 3 |
| 13-14 | telson subset | 3 |
| 13-14 | somatic muscle | 3 |
| 13-14 | hypopharynx | 3 |
| 13-14 | muscle system | 3 |
| 15-16 | amnioserosa | 3 |
| 15-16 | hypopharynx | 3 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0038981 | CG5346 | overlapping | BDGP FlyBase |
| FBgn0053099 | CG33099 | 3971bp upstream | BDGP FlyBase |
| FBgn0038980 | Octbeta1R | 4872bp downstream | BDGP FlyBase |
| FBgn0053093 | CG33093 | 5745bp upstream | BDGP FlyBase |
| FBgn0038983 | CG5326 | 7225bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
aatgccgcaaggcagcgatttaattgcttctagctagctgctttgggggtcaatggctctggtggggcgagaaggtcaagagagtgcttccaccaaggccaagccgcactgtactccaagcgaactcgaatctctgggtgagccctcggcgaaacctgcggcccgataagcaaacagtgcgtatgcgctacatttccatggcgtttcattaccgccagaagaagaaactgtgtcacgtatcggcaaagacccagttaacacaatgggcacggctcccaaaaaggcaaatggaaaatttttgtgtggccaaagaagggcagaagaaacggtgaggaacaaacaaagtcattaaatcttttggaacaaatttgaacccagatatctaaaaggttaaccaaagaagttcaaagtagtgtgggcaacacacaaacaatgtcaggaaactcagatatctaatattcttaggaatctcacagatactctaactcacagatacattttttaaagtcagcttgcatatagctgtgtaatgtgtaatgtgatttcttattagcattttaaatatttatcggcataaatatgaatgtgatttaattattccaccacattggtccacttttctccaactaaattgatactctaattatcgaggagtgtgcccgacttgctgcgatctatactgatttaaggagcaattactcaaaaaattactcatgatttgtgatacccagaaatcgcagtaaaatagcaggctataacaacgtgatacttggtttcccggcatacgtatgtacataagtgttatattaaagtacttcatagattaactatctactttcaattagttgacgttgagcgataagttatacattcttcgaaactttacagtcagacttcccccatctcgcccgaagatcccatttgcattattcatttgttttcggatagaaccgcaggtgcagggatcaggtgtccggtgcacaagccggtaattacaacaaattaactacgacgtagttgtagcaccacgaacgaaattaagtaactgcaattaggggagctcgtttagttagccctgaacaattgggaatagtcagccgaacagaactgtcgatgactcagtgacgactgcacttaattgtgccctgagtgcactgaaaaaaccccagacggtattcgaaagattgcccatttcctgctacttaaagaaccgcaatcttatcgatagaacgcgtcatattatttaatcaaaagtgtgaattcaaaatacataaattggaacataaaaaacaaaatatagctgaataaaataaacctaacttgttgtatgtgtttatgacccatcattttgggaatctatgaatcattaagtttctcacaattttactagttgtattcaagtttacgtgtatgtagatacttcataaagcttgcacattagctagtggacttctgctaagtttatacactactgaactataccaatctgtggttttatggcctatacttatttttggattaatataaaagcaatataaacgtataagttgtttatacaggtgagtcttactttttgatggcagtggagtggcctaatcattttcacctctacgagacaagtcacagataagtgctatttttgaatggaggaacttcccattgatgtcaaattcccgcccttttctctccgtgtacgaacgctggcagaaatggctgcctagcaacgagttggagtggcgatcagcgtcatgtttaatgggatgttgtggttccatgggggataccacatatatatagacatagccccatgaaggggggtagggggaggtgggtacttaccacagtgggcgagatcgatgatcggaaccacgctgcgcgagaggagcgtgtcgagtttatcgtcgctgctctttgtttttatcattttgagttggtgtttgtgcttcgagtgacttccagagggtcttcgacgtccaaagttctttggtttctgattggggagagcaatcgaacactcgccgcacttgtgctcgctatatctttatcacaattcgatgaggggggactctgggtaccggaga
PCR verification status
Line verified as correct.