| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT45801 | chr3R 18352267–18354359 (2092 bp) | CG5346, CG33099 |
      active |
procephalic ectoderm AISN, posterior endoderm anlage, procephalic ectoderm anlage | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | procephalic ectoderm AISN | 3 |
| 4-6 | hindgut AISN | 1 |
| 7-8 | posterior endoderm anlage | 3 |
| 7-8 | procephalic ectoderm anlage | 3 |
| 9-10 | brain anlage broad | 1 |
| 9-10 | hindgut anlage | 1 |
| 11-12 | head subset | 1 |
| 11-12 | hindgut proper primordium | 2 |
| 13-14 | hindgut | 1 |
| 15-16 | not active | 0 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0038981 | CG5346 | overlapping | BDGP FlyBase |
| FBgn0053099 | CG33099 | 2375bp upstream | BDGP FlyBase |
| FBgn0053093 | CG33093 | 4149bp upstream | BDGP FlyBase |
| FBgn0038983 | CG5326 | 5629bp upstream | BDGP FlyBase |
| FBgn0038980 | Octbeta1R | 6468bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
tcattttcacctctacgagacaagtcacagataagtgctatttttgaatggaggaacttcccattgatgtcaaattcccgcccttttctctccgtgtacgaacgctggcagaaatggctgcctagcaacgagttggagtggcgatcagcgtcatgtttaatgggatgttgtggttccatgggggataccacatatatatagacatagccccatgaaggggggtagggggaggtgggtacttaccacagtgggcgagatcgatgatcggaaccacgctgcgcgagaggagcgtgtcgagtttatcgtcgctgctctttgtttttatcattttgagttggtgtttgtgcttcgagtgacttccagagggtcttcgacgtccaaagttctttggtttctgattggggagagcaatcgaacactcgccgcacttgtgctcgctatatctttatcacaattcgatgaggggggactctgggtaccggagaggatccgggatccggagacgaggtgcacttccagcgatggctgactaaatgaaactgaatggcagcagcgcgcagaattcgattattagactggttatgccgacagcgaaaaagaaaaacacaaacattcgtcgaatcgcgcatccgagtgtttcgtattattgtttttgcttaaatttcgtgctatttgtttttgcaacggctattgtttttgtttggctggcgagcaaaggctttggcagcagaaattaggtgggcagcgggcagggggtctttatgtctttacgatccgatacgatccgcaatgcgaacggctgcctgagtgattggctttggttggatttagaagggcgcgtggcggacgaggggcgatcgaacaatcgcgacgcgcttcttgggcggactaatcgccggctgttcggagcaggggttcctaacttctgggttccgacgcttatcgcacctgaatggccacaattttagctcggtttacgattttattttgcaaaaatgaaactgattgtgtgctatgggtttggtatggcgtgtgtgcatgtgcgtcgcaattagataaaatttaatcaaatcaaaaattgtgataactaaattagcacttgtcgttcagcgcgaagggggtcgggggtctacgtagagtgcttagtactcagtgcccagtacactgggtacagtggatattccggcttatggtgagcagggctcgaaaggtgagactatctaaagccgtcaacaggtagcctcgtctcggtttgcttttgcaatatttgtgatggctattaacgtggctcatgtacatgcatacatacatatgtacaaacaatacccatacagatgcggatgcatgtgcgagatacagatactctggttgcggcgggcatgtatcttgtatcttgtgtctgatgtcttgtgttttgtgttttgtatctggcagatcccgtttgcagtttaacggcactcggactcaggtgtgagccctcctgcccgccttttcaccccctaaaaatgcaaaattaaaatcgaaaccagctgagctgttgccaagcggctttgttcggcaaatgccggatgaacaaagtctggtctttcagccagtcagtccgtccgtctgcacggcttcgttttatatcaaggggtggggtgggattgggttcggggttttcagagatatagccggggaatgagtaagcatttgcctcgccttttttgccttgcaaaaacattatgccaacgagcagaggctcactaaaaaaaaactactgaatttactactcggagcgcctattcagcggaaagctggtgatttgtacttcaaagttgaaaccgatgagggctttttccatttgcttacagtgaaaactcgctttcttttttcgcacaggtttcgcttttcatcgaacacccgacccgaacgaacagcagttggccaacagtctagttagtcaattttcgtatcgctttctgctgctttttttgcacactttccatcattttgtaacacactccgatcgcgaatttaacccagatacacctgaactagcgcagagagcaacggcgtctgtctcaaaaaaaaacatttgcgatccgatccgc
PCR verification status
Line verified as correct.