Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT45975 chr3R 18697831–18700119 (2288 bp) CR43846, CG4704 activityactivityactivityactivityactivityactivity
active
brain subset, brain primordium subset, posterior endoderm anlage VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8posterior endoderm anlage2
9-10not active0
11-12brain primordium subset3
13-14ventral nerve cord broad1
13-14brain subset4
15-16brain subset3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0264428CR4384620306bp downstream BDGP FlyBase
FBgn0039029CG470425808bp downstream BDGP FlyBase
FBgn0017590klg27175bp upstream BDGP FlyBase
FBgn0265450CR4435044850bp downstream BDGP FlyBase
FBgn0039030CG666051243bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

caacggtcccatttttaacccagcactagttttcattttttccccctcagtcgtgtattatgcgtaaattgccgcagcgttagcgaccgcaaaatgtgtcggaaaaactttgcctaattagaaaatcacagcgaccaggagcagactggagcgttggcagcagattgcatgctcccatccgcttttccgaccctgcaaacctcagttttacggcataatttcgttgcgttggccacgttttgtggcactggcaagtgccaacagaactaactggttacgggcaggagcaggaatcctggtagctggtaactgttgggacctggtgtaattgcgggacagagcggggcagaagccaccaagcggttttcgagcgaccaatttggcatgcaaggcgcagttatgcaaggatttctttcatttcagttttccaacggctccacaggttgcaatgtaattagtgcataaagcggtgcatttgcacgcattcccgctgccatttgctgttaatgaaataaatatgtttgttcgtgtggccacaacaaaggcgggacaaatgaaagctagcgccatatttgttaaacattaagtggggacaatggccaccggaaacggattctataactggtgtgtgtgtacgccctgcgttaggcaacaaaatttttgggggcgctaaccgcggaacgcaaaaaaaaatgtgatgttgatgccggcgaaaacaaccagcgacaaacaacatgcaacaaacgaccaacaaccgacaacggcgagcggtcaagagccatttcaactgaacattaatgcgttaattgcattttcatgttgtcagccgactgtttatgtatgcgtgtggccacgcatgttcgtctacatgtgtgcgagtatgtttgtgcggtcagttatgcgatggtagtagccgtgcactgagcaaaatggtttgtagtcatccattacggattattgtgtttagatatattaaataattttaaaaacaatatcattcattaaatcaataataagaaacatttgaagatagtaaaatctgttttacttttatgttgacttttgaataatgctttgaatacaaattgtacacaatatttttgcagtgcacttgtttaattaaatattcagtgagcatgtgctaaactcattatattattcgactttaaaggatttggccaatttgagcgtttgatttgtgcgcaaagctcggcatatttttttccgtgcacacttgttagtcgaaggccgaaagacggaagccgccgtggcacataatgcgttaatgaagcgcactggagccccgatccatccgccccgttgccaccattagtcagcggacctggctgcgattcctctaatggcctaatgagtccgcaggccatacaaacccgatgtgcaaacaaaacagattgccagcgagcgtgggttagctactattagctagaatttcagcagcaggagcggagttaccatatccacgccaggatcaggatgtgtggtggcagagtgcggctgagcagggccaagaataacagcagttgtcaatgtatcattagcgtgctcgtcactcgctgttagccagttactgcggcaggacgaacaggacccacaggccaacggctgatgcaatagattagccatatcagcaaatgacaatttccatcggcgtcctgctttcgctttcagaataattgccagttccctcggggccatggaattccagcatggctaatgattccagcgcccgttgctttttgcacagattttttgggcccggggaattgctacaattggatttcacgccgtgatgatgaaaagttgtcgcatttttaagtgcaacccttgcagatgtcacccttgaatcattagtactcctcactgccactcaattgtgggggaaaagagtgaaagagtggtttgttgcaccacttgttagtccaataattgcgcgttgctcgagtggtgagttcgtcctgtctgtgttaaccagttgagtgctcgtttttggtccttttgccgccacttcaaaggcgaacagttcgcacctttgtgcacttcggctgccatttgttgtttgtttgtttgtttgtttgtttgttgttcccggcatgtcaaacacttaatgtcttgagggcttttcccgcagtcgcctcacaatttcgtttcgtttcatttgttttgaatttaaatgcggctgctgtttgaattgccattgccggttggttagacgcggcaaatgaattgttcgtatattgaatgcggaaggatgcggatgacagggtgaag

PCR verification status

Line verified as correct.

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