| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT46053 | chr3R 18848030–18850858 (2828 bp) | lmd, CG6688 |
      active |
head subset, anterior endoderm anlage, ventral nerve cord anlage subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | head subset | 2 |
| 9-10 | anterior endoderm anlage | 2 |
| 9-10 | ventral nerve cord anlage subset | 2 |
| 11-12 | head subset | 2 |
| 11-12 | visceral muscle primordium subset | 2 |
| 13-14 | brain subset | 2 |
| 13-14 | visceral muscle subset | 1 |
| 13-14 | anterior ventral nerve cord subset | 2 |
| 15-16 | head subset | 2 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0039039 | lmd | overlapping | BDGP FlyBase iFly |
| FBgn0039038 | CG6688 | 6834bp downstream | BDGP FlyBase |
| FBgn0265156 | CR44225 | 9949bp downstream | BDGP FlyBase |
| FBgn0039040 | CG13833 | 10976bp upstream | BDGP FlyBase |
| FBgn0085404 | CG34375 | 11747bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
gtgttttggccgccttctttggaccggagggcggtacggaagcgccgccggcagatttgcggcgcagctgtccgttggcgttgcgcagcgcgtggttcttgacatgtttgcggaggctggagggatccgtgtagcgcttggtgcatccaggcagctggcaggcatacggtttctgtaccaaatagagcgagaatcgatagagcgttgcgttagtactgtagtatttgcctcagatgcgagttcgcatcaaaccgcagcggctcagtgccgatgccgaaaactatgcaattgatttctcccattcgccctgcaggcgctcctaactcactcacactcacacacccgcacatggcacacacacacccatgcaaacgttcaccagctaacagatgggccagcgtatttgccaagtcaaatcgttttgaaatgtcatgctgcattttgtttattctggccaggcagcagccgctggccgaaagcgacaacagcaaggggcagtgcactcgaaaaaggttcattattaacatggaaactgacatttgtcttggacaaatggagcttaaagcttagaaattaatcaatcgttttagttttatcaaaaaaaagtatacctactgcataaatatatgcactgcaataactatgaaaactatctaggcatttccaaataaaatgtagagagctactaaaaagtgaagaatttctttttgaaacaccaatttttctgagtgtgtcgcaagcattggcagccgcgccaggccaacacacattgtatccttttgtgatcctgattggctgccctgccccttcagctaggcaacgaaagtaactcgtttagtttattcgatttgcctgccgcggttgttgctgttgttgcctgctgttctggccattgctgctggctgaatcgctggccttttcagctggttttgaccttttttccggttgtcgtacgcgctgacgcggctgctgttagtccctgcctctgtactcctgccccaccgtactcccttccgtattccgattgcgattcctattcggattcgtagtcctattccagctgctgttactttggccatcggccaccgctcgctctcacagatacagtacacacgcaaaactataaatcactcaggcagcgaaatgcgaaatgtgcacatgtcatgctggcagcagcaacagtggctccttcgaccatttcctttttcttttttttttctgccactctgagctcctgtttgggccgctaagcgccttggagtccattaaatcttaaagccgcttcacgctcgtcgggtgaagccccagctgcatcttttgcagccgcgagctcttcaatttccttttgacacgcactgcaaattgctgggaccccagagaagaggccaacccatcccggcaccgcccacgcattcagccgcactcatatgcatagcatatagggatactcaccgtatcgtagtgggtcctttgatgtttcgcccgatccgagctattgctgaacgctttgaggcaacctttatactggcagccataaggccgctcgcccgtgtgcgagcgttgatgaattttcaaattttccaaacgcgagaatgctttattgcagccgggaaactgtaatggaaaaacaaaaaggtggaaaggtgtcatcgaaaattgcaattaccaagggtgggagggaaggtgtttttttttttttttgcaaggaatggcgcaagggataaagcaagaggatgaggcactggaaggacgcataaaattgtgacctcgcagcagatgctgttactgttgccgctgacgcccgcaggtgttgcacgtagtagccccgcccactcgcaacactcgaccactccacctgaaaaggggcaaattacgtttttgcaacagaaacagtaagagaaaccgaaacagaaacagaaacatgtgtaatggcaaatggcagctggagcagcatcagtgggccaagttgatgatgcccgagccaatttaatcgaaaaaaaaaatcctgcaagaatccatcaattactcaaaaatcaaaacgaaagagcatggcaaagggcagggatagaagatgtagcgagtgttggccctaataacattaccagcaactccatttcaagtggactccggattccgttcggataccgcctcgcagctctcgcctcgccctgtcaatttctgtgattgccctgcgccgcacaattcatcatcccagcgatggcgcatcaaatgtcaacacgtgcacgataccataccataccataccataccatccaacgatgccacacaaacaaaaaggaaagcgaaacgcacaaaatgggatcctacggcggaaaagtcgtgtttggacgcataaacaaatgcgttcagctgcggccagggggaaaaaaaaatggataaaatccaaatctattgtttgatgtttgaaaaatgatattctatgagggattgaaaaggttggtaaacagagagaaaatatacacatgtatctcaatcgatggattcccgaacagagttgccatttttcttctaaacaaaaaaaaaaatattctacaaggaaatctccgaactagtcaatggggtcaaatgggttttggtcctgcatatagagtcatcttttcatccttaccggacatttgttgggcttctcgccgctgtgaactcgcatgtggatgagcagcttgtagcgggcattgaagggcttgtagcgcctggggcagtctagccagaagcaggagaagtcctcgcccttgcgcacatccacatggcacttctcgatgtgctcgacgaaggcctgttggtgcgggaactcctcgtcgcatcccgtcc
PCR verification status
Line verified as correct.