| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT46830 | chr3R 20331122–20333180 (2058 bp) | nAChRbeta2, CG13617 |
      active |
ventral nerve cord primordium broad, ventral nerve cord broad, brain primordium subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | not active | 0 |
| 11-12 | ventral nerve cord primordium broad | 2 |
| 11-12 | brain primordium subset | 1 |
| 13-14 | brain broad | 1 |
| 13-14 | ventral nerve cord broad | 2 |
| 15-16 | brain broad | 1 |
| 15-16 | ventral nerve cord broad | 2 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0004118 | nAChRbeta2 | 3828bp upstream | BDGP FlyBase |
| FBgn0039201 | CG13617 | 9878bp upstream | BDGP FlyBase |
| FBgn0003134 | Pp1alpha-96A | 12870bp upstream | BDGP FlyBase |
| FBgn0264791 | CR44021 | 14225bp upstream | BDGP FlyBase |
| FBgn0000039 | nAChRalpha2 | 14254bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
atcaaccggatgttcccgaaatgaaaccgctttaggaaccacttcaattggactgcatttcaattggatactacacgaaaaaattgtgaatggcatcatctgagtaatattatatcaatattggaaaatacacattcataataatgactttattcctaagagcgaataattataatccttagaccttggcgattggggatcgcagaacgcctaactacttgggcgtccgggatacgaaaaagaggcgtgcccgtatgttgaggttttttggctttaatagaatttttatgaacttaagtaaagtcgtgtccaaatcccacgcagattacacacgcacacacgcatccacagagatgagcgactttccgacttacgcaacagcaaaaagctttcaaaaaggctaagaccgcccatcggccatttgtacggaggccgagggtaggagggggggggggatggcaaagttggggagtggcaggacgagtgcgagtgcgtaaaatggcagttaatcgtgaccacgtaccaggactattaataaaagcgtctttagacctacattttgtggacatttcgttgccatttcgactgcacaacaatgaagccgcaaaagaagcagaactttggcgcatcattaatttcacgcagtctacaactgtcgagcctcccctcgcactccatccccctccatccatctatttgtcccttcgccccatagacaaaggccatgtgcagctgaaaacaatacaaaacaacagagaatgctatagtcgagttccccgactatcagatacccagcttacttagctagctattgtgaatgcaaacgcgaaatttcatcatttttctgggatatcgatagatattggggaataaactgagcaaaaaattaaaaattcggcagcaacgcgtctaatatacccttttactccatgagtaacgggtataaaaacaggatgaaaaaagccaaacttaataacaacaaaatggcctttgcggcctcatcttggcactgggtcactcacactaacagcccgccacaaacacacacatgccacttgccaaaggcacatattttgtaatttatcattgcacaatacacggactcacccatatgtttgtcctctttgttctcgctaaatgaactttagagtccaaaagaactcggctcaactattaaaacccgtcaatgacccttaaaggatcagaagtattctaggccgtaggctccgggctgcgaactctgggctgtagcctctggcaggatctctgacgggactaagcgggatctctatttcccttctcattaacaaaatatacaaaacaagccgtctaaccagataacagagtcaaaacgccaacagccatggcgttgtgcaaaaaggagaaaacaaacaaggaatcactttcaaattatataaaggacaaaccgaaagaaaaaaaaaaaccacccgctgtggtatcaaagtcattcgcacatagaccgcaccccttttgaactctaattgacgtgcttttggtcaaatgtagaaataccctggttttggtacatactttttcctgtcacgccgacggacacggagacacacgagtgcatttcaagggtgtttatgtgtcggagggcactgccaaaaaaatctctaagttcggtaacaaatttaccttgcacatcgcaaaacaagaggcagatacatttgcgcagaaaaaggccaaacactgataaatgtatatttattggcttttacaattggcctactccttgttttttttttttcgtgcatcacaagttgcacgagtgtgtatttggttagttggttggccaaacttagcatcgcacgtgcttctcccggttgccatttccccattttggccatttcgagctcaatcttggcgagaatcagatggtcgtggcccatcgcctagttgcactccgcgccgcgtttccttttcgggcgttttagtttatggttttgatttccgttgcgcaacgcgcttcttaattagctgccattttactctcggcttgcccttttttcttctgcttcctgtgtaattgagcgtg
PCR verification status
Line verified as correct.