Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT46950 chr3R 20579618–20580458 (840 bp) asp, tld activityactivityactivityactivityactivityactivity
active
brain anlage broad, brain primordium broad, procephalic ectoderm AISN VDRC

Annotations

stageannotation termintensity
4-6procephalic ectoderm AISN1
7-8procephalic ectoderm anlage1
9-10ventral nerve cord anlage subset1
9-10brain anlage broad2
11-12brain primordium broad2
11-12ventral nerve cord primordium subset1
13-14brain broad1
15-16not active0

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0000140aspoverlapping BDGP FlyBase iFly
FBgn0003719tld387bp downstream BDGP FlyBase iFly
FBgn0004885tok4772bp downstream BDGP FlyBase iFly
FBgn0015591AstA6634bp upstream BDGP FlyBase
FBgn0040600CG1363115455bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

tgtgcggcgacgctctaatttgtttaatttttgttcgttaattgtgttaattgattagttagtcgctgtgttaatggaccactaagttagctgcgagcccgtttctgtttagttcaagttatttctgttttggccattccctgcaatgagcgcctttgaggttagttgagtcctctttttggaactccggcaataattttccgagaaataactagattaccggtacttacagatcacagtgacgccatcgcgcctaaagcaaaagaagcgcgccgaaggacgcgagcccgccgtcgtcgtcatggctccgttctccgccaaggcgattgtgcagttcgaggatgtgccgataacaaagacagcacggcgccaggtgcgcgttctcaatcccagcgacgacgacatcgaggttagtgggttgcatacggcctggcaactgttatttgatcaatgttttacaggtcaaggtaatgaaggccatccgggaggagcacaacttaagcctggagtggatggagcacacggtgcctgcaagagatgaggtatccatggagctagtgtggagccccgtccttgaggtggcctgcaaggagacgctgcagctaatagacaaccgcaacttccgaaaggaggtgatgatcatactcaagtccaagagcaaccagccggtcaaggtcagtcaaaaaatgcatttgccaccccttttacttacataccctcttttgcatgtatctcttacctttctacctgaagaacccgcgcaaatttcctactgtcggcaagaccctgcagctgaaatcgccgacaggagctggcaagacaatgaaaagcgtggtatccg

PCR verification status

Line verified as correct.

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