| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT47165 | chr3R 20993164–20995365 (2201 bp) | lobo, dan |
      active |
ventral nerve cord subset, brain subset, ventral nerve cord primordium subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | ventral nerve cord anlage subset | 1 |
| 11-12 | brain primordium subset | 1 |
| 11-12 | ventral nerve cord primordium subset | 3 |
| 13-14 | ventral nerve cord subset | 4 |
| 13-14 | brain subset | 4 |
| 15-16 | ventral nerve cord subset | 4 |
| 15-16 | brain subset | 4 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0083946 | lobo | 2123bp upstream | BDGP FlyBase |
| FBgn0039286 | dan | 16941bp upstream | BDGP FlyBase iFly |
| FBgn0039283 | danr | 27540bp downstream | BDGP FlyBase iFly |
| FBgn0039288 | CG13653 | 28085bp upstream | BDGP FlyBase |
| FBgn0022800 | Cad96Ca | 30129bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
gcacacatgcagaaaacttgggggattttttaaaaattgtaaatcgaatggtaaggctagctaaaaaatattttggaaattagtactgataagaaacgttaagagtgcattcaaataaaattctgtaggcacataataaaaaagattttacaaaacttaaatttttaattttaattcttcgcagataagcattatttaaattggtcattgttcttttaaacaaaatgattttttataatcaccttttaagatcttgagcatttacaacacacctttaataacttgaatcgaaaatcgattgattttgtaatttccaatcccatgtcttatttttttcgcgtggaggtacactcacacacggacagagtcgacaacccgtgtgcaaaaccctcgcgttgcccccaccaccaccaccaccatcccatcacatgtcctgtttgcttcggcaagaacccacttacacacacagacacaccgtctaacacacacacacacgaacacacacgcgcacacgtgcttgtatgtgtatacttcgcgtaaatattgggagtccttgactacgcgatgtgaatgatgctgataaaatacaaattcttgggccgcggcgttggccgctagtgtatttacacaactgtacttatgcccagccggtcactgcccaagtccgaggcaaccacggatgggatgctcacgatgagaatgagtgggggttggttgggggggggggggggtttcggcgaaaggacgaaaaagaagtcccaccaccgcgggggacgacaacacggcccacgccttggcgcacaacattgactagccgctattacggggtcccgcgactcggaagtccaaaaaggacactgagcgaaaagtgggacaccttcttgtggtcagtttaaacagagttctaaatcgtataagaaggtcaagtaatcatacgattaggaataagtgatgtaccattgtttaatgctcataaaatcataataaattaggagttagaatatcatatcatattatatgtgcctataagcagctaaagttacttctcccattcgaaggttaaacggatcttagattttctttgtaaagggccaacccgttttgcgcagtgcacgaaatcttcttgtccagttagcgaacaaaaatctgcgacgaaattacgccacatgtgttcatgccacgagcaaattttcagcgaagctaacgtacggtaggcggacaagggacagcactttcatcttaggacgattctttcaagggacgaacccaatttcgccgtcccatcaggacgaggggtggcgatggtcgatggtttagcgggtgggggtcacggacatcatatgagttcgttgtgtgtgagtgtgtgtactgtgtgtgtgtgtgtgtgtgcgtgggtcgtgaacgattgtgtgagcgcttttcaggggtgtgggtatcgcgctaaatggacagccgcccagctcagacattcgcacacacacacatgcacacgcgagtgtgtgtttttcaggatattttactgtgaatgtgtgtgtgtgtgtgtgtagcctccaaccacgactcttcggctgtacggcttgtgtgccttgggcgcgggtccgtacacggcagcagcatcagccactttgtccaattttcaaacggtcactttttgaaacgaattttcctcgccgtcgccagcaccgcacccccttcccttcacaagtccaagtcgcccgaatagcacccaaaccactcactcataccactcacagcactcataccacccaaccgcccttagcgacgttgttcgcgcggcggcaatgattctaggccatgaaatcgacattcgcattttagaatccacttaaccaccggcgctagagaatctcagcaattcactatctgcatcttaaaggccgacctttgattttgatttaatctggaagtcgcttgttcaattgaattccatttacttggcaatcggtcatttcaaagtggataattgctattaggattcacgagcaaagaattcgttaaatttatgaatattcaatacgatggcagcatatcttgattaccgaatggaatggtatgttttctgtttcaatatttaacttcaatgtgaaagaaaagatacaaatagttaattacttcttttattttttgagttctcagtcaagtttattatttcgatgtctccgaagctcttctcgccaagtc
PCR verification status
Line verified as correct.