| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT47173 | chr3R 21008302–21010513 (2211 bp) | lobo, dan |
      active |
ventral ectoderm anlage, procephalic ectoderm anlage, dorsal ectoderm AISN subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | dorsal ectoderm AISN subset | 3 |
| 4-6 | A-P semi-stripes dorsal | 3 |
| 4-6 | ventral ectoderm AISN | 3 |
| 4-6 | trunk mesoderm AISN subset | 3 |
| 7-8 | ventral ectoderm anlage | 4 |
| 7-8 | posterior endoderm anlage | 3 |
| 7-8 | procephalic ectoderm anlage | 4 |
| 9-10 | brain anlage subset | 2 |
| 9-10 | ventral nerve cord anlage subset | 3 |
| 11-12 | brain primordium subset | 2 |
| 11-12 | ventral nerve cord primordium subset | 2 |
| 13-14 | ventral nerve cord subset | 1 |
| 13-14 | brain subset | 2 |
| 15-16 | brain broad | 1 |
| 15-16 | ventral nerve cord broad | 1 |
| 15-16 | brain subset | 2 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0083946 | lobo | overlapping | BDGP FlyBase |
| FBgn0039286 | dan | 1803bp upstream | BDGP FlyBase iFly |
| FBgn0039288 | CG13653 | 12947bp upstream | BDGP FlyBase |
| FBgn0022800 | Cad96Ca | 14991bp upstream | BDGP FlyBase |
| FBgn0039290 | CG13654 | 17238bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
ttgttgctccttgttgtgtatacgcctctacttatatgtacgactacactatatccttgggcctgtgttttcgtgtgcgtgtggctgtgcgtgtacgtgtgattgtgcgtttcggacatggattcaaaaacctttcttagcgatttcccgaaaggcagcaactagcaactctggcgacactgctgctgtctttttcgttgccgttgttgttattatggtcagtggccgccttcgttggccagatacaatagggaaatagggagctatgtatgtgcgattgtgtgtgtgctctgcgcaaatgttttgcatagcaactactaagtctacgacctcaaaatgcctatgtgtacacacgcattatataagatcgtaatctcggggctatcccacgatggtgcaaatacttgtcaggtttttcttctctcgcagaactaatcaaaatacactttgacttgaaacttgcttgggaatgatatcaacaatctatttaacatggttttttattcctacctagagcttatcagctcggtaattaatattacaaggaacctaaacatcttaatgcgtaaccatgttaaacattggtgtataccaagcattgaatatgttgtgcactaagtatatgaatatgtatgaatatgtcggcactttaatggaaaacataagttattgtcctgcctacctatatacactacaattatattattcttggtagctaaatatgggaaatacatattttgaagctggctatcacctgaaatttgcagctgattagtttcttgtcccacaatttgaattcgattatttcgccatctgacatttctaaaccgcagcaatttgcctgcaaaagtcgatggagaaacaaccactatgtcatgcccatatctttgcgatcgagtgtccgttcgagaattccggttccttcggcgatcgccggtcacgctccagcgaaaagagcgacgaaaagagccaagaaagccactctgttggacggattcgccttgttttcaagaatgtgggtttcccaaggggggtttccccgtggggtcaccacctcctgccgtcataacttcgttcggttcgggcggcaaaaagccgaagacgaggacgaaagctgctctctcactggctctctccctctctctctctctctctcttaaggaagaggatgttcggttctcatttgcctcagctctttgcgaaacggtcgcgaaagagaggcgagcccacgtaatctgcgatgaaggcatgtatcaaaacaaagcgaggaaaactggccgcaatcacaacagcaacaactgcagcacatgacagcgggaaaactagcagaattatcagtgacgataaaaggcgcaccccctactgcgaaaattagacagggatttcggctaggtttttcacgttcttctcgcagatccgttgctcgtttgatagttgttgcccagcgtttaaggaagcagaaaatggcttagctaaacgcaagcaaatgcctcctgaggttgcacacagtcttacactggaaaaaatctagattttacctaaaactaatacagaatacaaggaaatataagcttggcagaaaagtaatatatacttttcatcacaagcgatcgtatcatctattcgtttatttgtatgaaatttcattttcatagttataatcatggaatatatgtacataactaagagatacaaaattgctaaattattatactaaatttcgaattcttaccaaatttaataacattatctttactaaggtatcaagatttttctctctgtgctcacacacacacgtgggcgcaagaaaggaggccgaaaaggatgtgcgtctctcaatctcaaaaagcctagcacgagtattgcgtcgtcttcgttgcacacagctgtgtgtccgcacgtgtgtgtgtgtgtgtgtgggaggatgtgctgtgttagtatgtgtgctcgatatgtgtgtgtgtgagtggacactggcctgtggttgggccggccaaaatgcgaaaatgccaaaatgcgaatattgcgaacggggcagccaaagcgagaggacttcttcgccgccgtcttgaccgttattaatcattgtacatttggctgtcaccgaaaaaggccgcgaatttcgcaacagtgagagcgaaagagagcgggcgaaagagagtccgagagagggagcgagagagagcgactcacgcacacgtgaaagaaacaa
PCR verification status
Line verified as correct.