| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT47416 | chr3R 21471304–21473433 (2129 bp) | jigr1, mir-92a |
      active |
procephalic ectoderm AISN, head mesoderm AISN, ventral ectoderm anlage | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | ubiquitous | 2 |
| 4-6 | procephalic ectoderm AISN | 4 |
| 4-6 | head mesoderm AISN | 4 |
| 7-8 | ventral ectoderm anlage | 4 |
| 7-8 | procephalic ectoderm anlage | 4 |
| 7-8 | head epidermis dorsal anlage | 4 |
| 9-10 | ventral ectoderm anlage | 2 |
| 9-10 | brain anlage broad | 4 |
| 9-10 | head epidermis dorsal anlage | 4 |
| 11-12 | brain primordium broad | 4 |
| 11-12 | ventral nerve cord primordium broad | 3 |
| 13-14 | brain broad | 2 |
| 13-14 | ventral nerve cord broad | 2 |
| 13-14 | brain subset | 4 |
| 15-16 | brain broad | 2 |
| 15-16 | ventral nerve cord broad | 2 |
| 15-16 | brain subset | 4 |
| 15-16 | gonad | 3 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0039350 | jigr1 | overlapping | BDGP FlyBase |
| FBgn0262411 | mir-92a | 924bp upstream | BDGP FlyBase |
| FBgn0262388 | mir-92b | 5816bp upstream | BDGP FlyBase |
| FBgn0027508 | Tnks | 7509bp upstream | BDGP FlyBase |
| FBgn0261986 | RASSF8 | 16213bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
gaagcgcccgaggactgaagagagtcttcgaaccgttgggggcgtatttgcctaacaaaaataaataaatatgaatttattgcagctcttgctcagtgcggaatttgttgctgtgtcgcagggaacaacattaaaacctaatgccatcttgggccacgaaaagcgccgccagcagcgatcaaataaacaaataccgagcaaagctccgcttctccactccccccagaagatattattagtatttttatatgctggttttcatttggggcagataagcgaaataagctgaggctctcaaacagttggagcagtaaataatctttggaaaagcctggaaaaagggggtagcacgggtgtgtttttgtagacttctttttttttgctgccctggcaattcttccgctcagcagatttgttcattttttctgcccgcctccgagtggttctggtttctacgaatttgtcacgctttggatttcaaattttgttgatgttagccaactgttaatggaccccgcagcatactttcacatatgtacatacatacatacaagcttcctcttgcaaaatgatgtgaggcgtaagtaaaaggcatttaacgcttgattttgtgcagggtttagttttacctgctcccgatcctatgcgatcagaaactcccactcctcgaggacccaggactattgttgggcatttcgcagacccgcacaaaggacactcaagtaggggcggaaatttaatatgaactgctgcttattttttgtttctctgcttttgaaattcgagatttttgggctttggtcgatgctcctattgttcgcctacctgcctacctgttgatggtattatttgtgaatgtttatcaagatgttccatgtacttgctgaaactcaatattcgtgatctgattttcagccgaatataaatatgaatttcccgtaggacgggaaggtgtcaacgttttgcatttcgaataaacattgcacttgtcccggcctatgggcggtttgtaataaacaactaaaatctataaaatttatttattattactaaagtcatgtctcgtatttttgcttatgaaatattttctgttgtttcagatctcgaattcgcaatatcagaacatctgtgttattttaattatataaaagtatatatacaggtgagtttgcttcttgtttattctatgttcttatgtgtactcaatcgctttcaattcgtgttcatattatcccacacttcccagttacatttgatatttaaacatttcccaagcgcgcgcgctattctggtacttttcatcccttttccgttattaaaatgcccgaccgtggttgccacttgtatttgagtcgaaaacgctgccacctggttggctgtgtgctagagatgtgcaattgaatggtctgtgcaatgaataaaaagtgtcccaatggtgcaatgcagtttaaaatgattaaaaacgaaaagttaatactataaactacaataaaacaacccaaacgtagcagaagttagagtggtgctaactgggttgactgcatgttcaaagtcgggcgtctcgcgcgaaagaaatcgcctcacggtcgcatctctactacatggggttcggcgcctgtgtgagcgagagggttggtgcgcgcgtggtcgtgcggttgtgtgtctgtgtgagtgcctgtccctgtgtgagtgccgctctcttgcggcttgcctcgtccgtaattcgtaaaatataaaaataaaaaattttttcagtttcagtttaaaaaatattctcacagcgactagttgtgcgtgcaggcaaaaagacagagcatcgcgagcgaaagagagcggcgaacatcgcactggcggagcgtcgtgtgttgcgcaggcaatcttaattaatttatttacgtctatattgattttttaaagtaacagccacagctacagttagccataatagccagctagaaagcagaggcaagcccaagcgcaacgcagagcaaagagcgcgcgttttaataggtataaaaataaaaatacacactaaaaccaacctgaggcgaatctaaattgtatttctcgaggtgagtaaatctataaaaataaattaagatatttgttaattcgatattgccagccagc
PCR verification status
Line verified as correct.