Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT47606 chr3R 21827389–21829567 (2178 bp) CR45037, E(spl)mgamma-HLH activityactivityactivityactivityactivityactivity
active
ventral epidermis primordium broad, head epidermis lateral primordium subset, dorsal epidermis primordium broad VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10head epidermis lateral anlage3
9-10dorsal epidermis anlage broad3
9-10lateral epidermis anlage broad3
9-10ventral epidermis anlage broad3
9-10head epidermis ventral anlage3
9-10head epidermis dorsal anlage3
11-12ventral epidermis primordium broad4
11-12head epidermis lateral primordium subset4
11-12dorsal epidermis primordium broad4
11-12head epidermis ventral primordium broad4
11-12lateral epidermis primordium broad4
11-12head epidermis dorsal primordium broad4
13-14epipharynx4
13-14head epidermis broad4
13-14trunk epidermis broad4
13-14clypeolabrum4
15-16head subset3
15-16trunk epidermis subset2
15-16posterior spiracle3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0266397CR45037overlapping BDGP FlyBase
FBgn0002735E(spl)mgamma-HLH907bp downstream BDGP FlyBase
FBgn0266398CR450382611bp upstream BDGP FlyBase
FBgn0002734E(spl)mdelta-HLH3035bp downstream BDGP FlyBase
FBgn0002733E(spl)mbeta-HLH3379bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

agtctgtgctggcggggtgtaataaatttaaaaaggaactaaatttatagagatttttcagctgattaaaattctgttaacttgctaaagccgaaagtagattatctttaagaagatcttcttcacaacagccctaagtgtttatacttaattttacatttccgtcctttttgttttcttgtgtgccagcaattatttatggaaattaataagatttatagcttatggttactagcttataaataactaaaaaaaaacgtttataattttttaaattgtttaaatccttctgagatatcctttgtagataatacgctaaaaatatttgtatttcacttgcaaattctgtgtaatcttaaaccctataatgtactgaacaagatcatttccttcaatgtttggatgtcacttccaccctgggataacataaagtgtaataatggacactccttaagagccatgttaaattatagctcactttcgatcctaggccattcctggatgatccgatcaaggcgacacaactatggactcgacaataagaggaccaacaccaatccaaaccaaaccaagcaagcccagttgtcataccatacaatgggcaataagaaaaagtcggttatagggacatgcggaggaatcgcacccaaaatgccaaaaggaaatgctggcacaaaagatacttaatcttataggtaaacccgatgaatgatgaacgaatggcggcgacgtaaccgaacccccgatacagcaatccggcaatccggcgatcgagctcgaacgcaagcccaagtcattaaaaactacaatacacaaactgcatacgaatcactcgaagaccgaggcccaaagaaagggtcttattttttaggtaggggaagggactgaagactgaagaccggggaccgtggccagaaaaaaaaaactaaatatcagaagcgaagatcgtgagaaaatggtttggaacgtggttctcacacgatcgacacacctgcccttttttgtatgtgtgtgtgtgtgtctggctgggccaccactcaatgcgtgtgtgtgtgtgtacttttacgaattcaagatacaagaccacttacgggcaagatcacgaccgactcgagctgcggctatatggctatggatcgacatgaaagagaaaagcagcgtgcggtaagtgtgtctcagtcgcagactcagctcagcttcagcttcagcttcgacttttgtgcattggccaacattgtaatgactgtggacacacgatcgttaagagcgcgccgtgtgatctgtgaaggaaaaggggtacgaggtgtttcaggggctacaactatgggttcggggttcggcgcatgcgtcgctgttttgttgaacgaactcaatttagttggtttatgaccaaaaagcgagagcgagcgggatgcacgaggagatcggttatggtgatcggagtgggagatgctcgttggggagtatgggagttggggagttgaggagttggtcgtcggagcattggagcgctggagaggcacccaaccacacttatatggtgtgctattgactctgtaatatctttaatatgggatgttgttacactacattggcacacgctcttgctgccactggacaagctgcccacaggttgtgtttgtatgggatcgtatggggaatgggtttggatatgggtatgggaatgggaatgggaatgggagtggatgaagatcgaggcacgagtgccgactccatcccagtcccatcctccagcctccatgcacagcccattgccaggccggtttgccgccgcctctcttttattaagtggtggtcttgcgcttactttaatatggctgcattaaaccttagcggcgtgcggagtattatgactgaagtaggtggccggacccgcggtgcctgcgattgggggtccaccgacacacagaggtcacgtgatggatgacgtgtgggctctactgtacctcctgtcacaagatacgaagtgggttgggtgaggtcgaaaacatggaatgggatcattcaataattgcaacctttggtgaaatcttcaaaaattattgcaatcgttatatgctgtttaataatagctatttgcaagctacagtgtagaatttacgaaatattctagttatgagcaaaccaattttgagtcatcattggcttttgttcctga

PCR verification status

Line verified as correct.

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