Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT47967 chr3R 22526268–22528511 (2243 bp) amon, TwdlQ activityactivityactivityactivityactivityactivity
active
lateral epidermis subset, trunk mesoderm primordium, visceral muscle subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10not active0
11-12trunk mesoderm primordium2
13-14lateral epidermis subset3
13-14visceral muscle subset2
15-16lateral epidermis subset3
15-16visceral muscle subset2

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0023179amonoverlapping BDGP FlyBase
FBgn0039448TwdlQ6957bp downstream BDGP FlyBase
FBgn0039449CG642514619bp upstream BDGP FlyBase
FBgn0039450CG548417325bp upstream BDGP FlyBase
FBgn0250908beat-VII18581bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

cttggctccgttgctgaatgtggacgccagcgtggagctgcagctctcgtcgtagtgggcgttctggccgtcgttaatggcactgttaatggaaatggtccacatggaggcggcgtagccgtcacaattgcagtcatcctcctcgccgccgtcgccggatgcccaaacatagatgttgcccaggccatttcgaccctgcgggtggtgtgaaagattagccataaattccaagaactggacctcgtggtctcccagctcaaccgtacctcattgacgccctggactatcgctcgcatggtggcattccggggaccgtccacggtcttgccatcatcggtgggaccccaggaggcgctgtatatgtggattttgtgcggctcgtggcccatggagttggcctcgattaggtccgtcatgtacggctgatccagcatgcgaatgcctgttgagcgagcgataagtatgcattaaatctaatggcggaaattataaatcaatatttatacgatccccgccaaccatcactttcacttgacgctttatggcaatcgtaaaaattgcagtgcatttcccagctccgcctgtggttgttcgaaattttgcccgatttttcacatgatttctccccggcgagcgataaaaatgacagataacgcggctggatttgcgaccgcacttgttgcctccccattaccaagaaaaaatatctacaatttcatgtaaaaatcacattttttcggagctcaatttacaataatggaacgcgctccatgaactttacactttacagatagcagatacatatgtacacggcggtagctgacaattggttcaccccgtctttttgcggattacgccgcgtatgcgtaatgcgatttatcagccaaaaactttggaggtcaggacctcgaaggcgtcgctgtacacgcatatgtatatttattcagcgaatactgccaaagccacttacctgcgattttgctgtcataagcaacgccaacgccgcaaattccattatctctggcagcagccacttcgccggcacaacgagttccatggctgaaaaatgaacagcggaccaggatgagttggggttaaacattcagagagctggtaagcagcttaataaaaagtactttctatccattaagcagtgcgtataagctgacaaactatcaagtgaacttcagactcaacggaggagaacattaaattccgcaactgccttttaattagtcaaagtttgtctttgctagaacgatgacaatagcagcttaacccatccacttgggcattccattccaatcgtatgacacaaacaaattatcctaaacattccagttggctatcaaggacattttacccaaaatcgatagcttttccccctttggccatcacttacctgttgaaccagtcgtcggtgtatcggggatacggaaagggatcgttactgctgaagtcataactggcctcggcgttctggaaatgagcagattaaaccagataaaatacgaaccaacatgtgtgcgttaagtaggttttgttgtagcttttgggaaaattattcaatttactccataacatttatatttggaagcaaacctctttgcatatgcatggctgataagccctttgacaataatgactgtggaaagttttagtgtcaggaaaagttttaagcttttagcttcaatttcctgccaacttttattattacgcacattaggggtttcaacggtccgttgctaaattaaatctcacatctagagccacagcaactgtgggctatttggccatgaataattcctcactggcaatcgatatgtgcagtaagccaaaatttaattaaaagcttgctattgccattcgatggacagcgtaaattgaaagggtttccaggcattcatgtgcgtgtgggttgtactcacataattgaatttcagatccggatgcatgtagtccacgcctgggcagagaaaacgccacaataaagtaaaaacataataaaccagtagattgcatttttattcattcattcatttccgaaaatactcaccatcatccatgatggccgtcgtaacattcttcccggtgattccctgggcccaggcagcctgcacattcagatccagcctgactttgccgccattctgacccgtgttcttgaggtaccattgcatgggaaagtaggggtcagtgggctcctcgtcaatccgattgccctcgccaactttcaggtcgaac

PCR verification status

Line verified as correct.

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