| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT48356 | chr3R 23280724–23282838 (2114 bp) | CG13978, CG44290 |
      active |
ventral nerve cord primordium subset, dorsal ectoderm anlage broad, ventral nerve cord anlage subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | dorsal ectoderm anlage broad | 2 |
| 9-10 | ventral nerve cord anlage subset | 2 |
| 11-12 | ventral nerve cord primordium subset | 3 |
| 13-14 | ventral nerve cord subset | 1 |
| 15-16 | ventral nerve cord subset | 1 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0039518 | CG13978 | 9187bp upstream | BDGP FlyBase |
| FBgn0265317 | CG44290 | 14059bp downstream | BDGP FlyBase |
| FBgn0263401 | CG43447 | 14158bp downstream | BDGP FlyBase |
| FBgn0016061 | side | 17521bp downstream | BDGP FlyBase iFly |
| FBgn0039519 | Cyp6a18 | 23673bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
ccaaatggaaaattcatgacagagagcagaaataattaccgcatgaatcgggggaatcaagtgaaagccgaaatggtttacagtttcggcttgcgaaagttgtcaatgtcacgacaacttactgctaatcattgtaatgcctccggctcagtgagacgacgaggacaaggcgaatgcttccaacgtaaaaggatggatggtaaataaatgagtcctggcattccatcctggccgcatgatgcggctgacttggccaactgtaaacgagcaataaatgcgggctcaagtgtcataagtagctgactgacaaagcttgtatctgtatccttgagtttgtatctcgactcgagcggcgaatcgtgaaatattaaatgcgcccgtgtcggtggcattgttgaaattaaatggatagcgcggggtagccagtaatgtgattaccaaaggagatcctctgactccgcctattgtcgtctcctgtcagttggctgcacttcaacttcaacctttcgcctccacttaggcacgcccgattgagcagcaaaagatgtgactctggatttggtgttttataatatttcctctatatatatatatatatatgtctttcattttttctttttgccactgtcatcgtgcgggctatgaaatatttagccaatgaaggggaaaatcaaacaagagattgagctgcgcagccaattatgtgccacgtcacgggattttctgtgttgtgttgtgttgtgtgttgcgttctgttctgttgtgttgtcggtggttcctacaaaatcagcgctcagactaattaaacgagaacgcagctccgatgtagcttagctttaactactagctcgccaacactacaatggcagcgcattgggtcattttgcaattaagctgcagtagcatgttgccggcgagggtcataaagcctgcatcccatgtatccgcatccgtatctatagcttcggccatactccgacaccgattccgtgtcccagtccctgtccctgtccctgtccctgtccgccccctccgtatgatgatgatgaatgagttaagcggccgttgccatgtagctgcacgtctaatgagatactttttctgccgctgccactgaagatgaggatgagttctaggatccggctgggcatgtaggtggagatggagccgggtagagcaacaaggatgagcatgtggctatgcccgtgaatgtatcttcatctgcaagtacaccattagtagcgaagggtcaggcgacgcctagctcaactgcaaatcatgactcgccccctttggaacactgggagaaactcagaaatcagtgcatagtgttgatccattattattactcattgataaaaatatagatattttctttttaataaagcggtcaaaggggtttatatcataattctacttcttatctaaaccatttataaagtgccagacttcctaactcatttgtccagtggagaaaatcgccgtcatcgtcgctgtccgtcagctctttcaactatgtaatctatggcatgtcagtgtctgtatctgtatctgtatcttcagccatctcggttatctacactctccactcaggagaacgcacaaatgcagagcgtatctgtgtgtttgtatgtatgaattgctcgatgcgtgcccaggcactaattgcgtctaattgaattgcaattgaccgtgagttggcgtatttttcattcgtttttgccgacaccgccagcgtcgatctggagctggagatatatcccctggttcagggagaattggggcagcggtggggctgcgagctggtaaactggcaaactggcaaactggcaaagtggcaaagtgggtgggaaaaggaagctggagcagtggaggcgacaacattgtttgatgaagatttacgcagctgctttgatttgtgtcaacaacgcccgccaacaacgacatcgcattccatcccatacacttgctcattcatggccccatctcaatcatttggttggtcatggcgccaatgatttggatgagcaactgcaggggctttaacaactggggagacaattgatttataatgactgtgaatttatttggccagctatgtggggagtatgcgag
PCR verification status
Line verified as correct.