Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT48928 chr3R 24386167–24388422 (2255 bp) CG12413, Ppn activityactivityactivityactivityactivityactivity
active
brain broad, ventral nerve cord broad, mesectoderm anlage VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10mesectoderm anlage2
11-12brain primordium broad2
11-12ventral nerve cord primordium broad2
13-14brain broad3
13-14ventral nerve cord broad2
15-16brain broad3
15-16ventral nerve cord broad3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0039588CG1241315629bp downstream BDGP FlyBase
FBgn0003137Ppn20122bp downstream BDGP FlyBase
FBgn0000659fkh20638bp upstream BDGP FlyBase iFly
FBgn0262741MRE2325603bp upstream BDGP FlyBase
FBgn0263388CG4344033043bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

tggtctttccatctccaaacaactccatccttttgattgtagcgtatgtgggactggtaaaattctaataatattgcgcactccaggcacaaaccgaatccatcataaatctcggcccggctcgatgacaatgcatcatccgtgtgcaaacagagtgctaaatctcttataatatcctttatgtccaggatgcgccatatgcgtgtgtaggctaaggcatgagcacacaatcacaatcacatgtgagagcagtgtgtgtgtgtgtgtgtacctcggttcgatttaaagttcgtttattaaattccagcagaagtggcagtccgaattggggtatttaagctgaattgaaatcgaggaaagtggccaacgtctctgttccgttctgttcttttccattctgtgttccgtgtttggccgctctgtgtgtatctacaagatacaataacttggtccactagtgcccccttcaaagtagccgaaaagtaccgacaaagtatgtgcaaacaggaggccaaaaaggagagcgcataaaacaaatgaaactcttgtcgtagcagccgagaaaagcacaagaaaatttcaagaaaaatattaagacaacaacaaggagggcaggcggcaaatcctcgagtgtctgctccacggatgtgggcgtcgggggcgtggcaggggctgaggcagaggcagacagccagccatttgtaatagttgccaggctgcttcctgtttggcagccaggcatcctgcgccagtaccgccccccaaacaaccccacaccccgagccctcactgacggcaataaaatgatataaaagtaaaaaagtaaaaaaatcaaatgtagaaaacaaagggcggggagataaagccaaaccagggacagagaggaaggcagttcttgatctggttgctgtagctgctgctgcgggcgattccacgtagtcgaatcaattcaaaacaactgcgaatgcaatttaataaaatccgtgcacgggcgaaattcttttcaagacgagagcagagcagagagtgaaatccgggtggttctatattgccggtggtggtggcggtggtggtggtgggttgagtcctgaatcccgaagcacaaagtccggggcaaggagtaaagccagcccagcgcaaaacaataaagcgagcttgtgtacacaagggatatgctcctgtctttcggcacacacatacacacacactcgcacatatcgcacacactgatatatacatatgagtcctgtgtaacagtcgccatattggcagtcctttcggttgccttctttgtttgccgagcgttgttaatttggcaatacccgctttcaattatcttataaatatgaaaatgcagcagcaaacgctgcaggcaacaccccaacatccggccgaatcgtaatgaaaaacgtttcatttttcattaagaatatacaaagaccaactgcgctgtgtgcctttcagatcaatcaaaaaatcatgacgtacactccgtgtccagatttcgtactcgtttttctccaccgcccgattcccgattgtttggccaaggaccaagacgcatgaaagtggcaaaagtcagcgggtttcgcgtacgtgccaccagcaacattcgttgcatgttgccggtacgccatcgtgacgcaattgtgggcattacccgggcggattgggaaacgtccgctcggctcacgcacctttacctctagtgaaatggaaaaaaaaacggacagacagtacggactaggcgaggtcgccactccgttgcgcatctctggcaatgcgcaaatatgtgcacaccagcaacatctacggacagcaacagcaatgatcaccgcagcgacactatttcaattagcaactgcaatgcacgcgctaaaatatgcaaagtgcctgccactcgcgtcatgcccatagcgatcgatgctcctcctgccctccagttgcttccccggatgccgccgatcaatccagcacttgaccccgccatttgcgaatgttgttgctggcacactttgcaccgcggattgcttattgggcgtgtatctcgctgtgtgggtaaatatttaacgcgaaataccgcgaaatggccagatacccgggttaccagatactccaacataagccggggagcagcagccatgcgattctgcgacggacgctccttcgaaatgtttggaaatcttcggagcatgctcagcgatctggtcaattatcaccatgtttgcccatggaataccgcaaatacgggcattg

PCR verification status

Line verified as correct.

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