ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
---|---|---|---|---|---|
VT48928 | chr3R 24386167–24388422 (2255 bp) | CG12413, Ppn |
active |
brain broad, ventral nerve cord broad, mesectoderm anlage | VDRC |
Annotations
stage | annotation term | intensity |
---|---|---|
4-6 | not active | 0 |
7-8 | not active | 0 |
9-10 | mesectoderm anlage | 2 |
11-12 | brain primordium broad | 2 |
11-12 | ventral nerve cord primordium broad | 2 |
13-14 | brain broad | 3 |
13-14 | ventral nerve cord broad | 2 |
15-16 | brain broad | 3 |
15-16 | ventral nerve cord broad | 3 |
Whole-slide images
Neighboring genes
gene ID | gene name | distance | links |
---|---|---|---|
FBgn0039588 | CG12413 | 15629bp downstream | BDGP FlyBase |
FBgn0003137 | Ppn | 20122bp downstream | BDGP FlyBase |
FBgn0000659 | fkh | 20638bp upstream | BDGP FlyBase iFly |
FBgn0262741 | MRE23 | 25603bp upstream | BDGP FlyBase |
FBgn0263388 | CG43440 | 33043bp upstream | BDGP FlyBase |
Sequence
tggtctttccatctccaaacaactccatccttttgattgtagcgtatgtgggactggtaaaattctaataatattgcgcactccaggcacaaaccgaatccatcataaatctcggcccggctcgatgacaatgcatcatccgtgtgcaaacagagtgctaaatctcttataatatcctttatgtccaggatgcgccatatgcgtgtgtaggctaaggcatgagcacacaatcacaatcacatgtgagagcagtgtgtgtgtgtgtgtgtacctcggttcgatttaaagttcgtttattaaattccagcagaagtggcagtccgaattggggtatttaagctgaattgaaatcgaggaaagtggccaacgtctctgttccgttctgttcttttccattctgtgttccgtgtttggccgctctgtgtgtatctacaagatacaataacttggtccactagtgcccccttcaaagtagccgaaaagtaccgacaaagtatgtgcaaacaggaggccaaaaaggagagcgcataaaacaaatgaaactcttgtcgtagcagccgagaaaagcacaagaaaatttcaagaaaaatattaagacaacaacaaggagggcaggcggcaaatcctcgagtgtctgctccacggatgtgggcgtcgggggcgtggcaggggctgaggcagaggcagacagccagccatttgtaatagttgccaggctgcttcctgtttggcagccaggcatcctgcgccagtaccgccccccaaacaaccccacaccccgagccctcactgacggcaataaaatgatataaaagtaaaaaagtaaaaaaatcaaatgtagaaaacaaagggcggggagataaagccaaaccagggacagagaggaaggcagttcttgatctggttgctgtagctgctgctgcgggcgattccacgtagtcgaatcaattcaaaacaactgcgaatgcaatttaataaaatccgtgcacgggcgaaattcttttcaagacgagagcagagcagagagtgaaatccgggtggttctatattgccggtggtggtggcggtggtggtggtgggttgagtcctgaatcccgaagcacaaagtccggggcaaggagtaaagccagcccagcgcaaaacaataaagcgagcttgtgtacacaagggatatgctcctgtctttcggcacacacatacacacacactcgcacatatcgcacacactgatatatacatatgagtcctgtgtaacagtcgccatattggcagtcctttcggttgccttctttgtttgccgagcgttgttaatttggcaatacccgctttcaattatcttataaatatgaaaatgcagcagcaaacgctgcaggcaacaccccaacatccggccgaatcgtaatgaaaaacgtttcatttttcattaagaatatacaaagaccaactgcgctgtgtgcctttcagatcaatcaaaaaatcatgacgtacactccgtgtccagatttcgtactcgtttttctccaccgcccgattcccgattgtttggccaaggaccaagacgcatgaaagtggcaaaagtcagcgggtttcgcgtacgtgccaccagcaacattcgttgcatgttgccggtacgccatcgtgacgcaattgtgggcattacccgggcggattgggaaacgtccgctcggctcacgcacctttacctctagtgaaatggaaaaaaaaacggacagacagtacggactaggcgaggtcgccactccgttgcgcatctctggcaatgcgcaaatatgtgcacaccagcaacatctacggacagcaacagcaatgatcaccgcagcgacactatttcaattagcaactgcaatgcacgcgctaaaatatgcaaagtgcctgccactcgcgtcatgcccatagcgatcgatgctcctcctgccctccagttgcttccccggatgccgccgatcaatccagcacttgaccccgccatttgcgaatgttgttgctggcacactttgcaccgcggattgcttattgggcgtgtatctcgctgtgtgggtaaatatttaacgcgaaataccgcgaaatggccagatacccgggttaccagatactccaacataagccggggagcagcagccatgcgattctgcgacggacgctccttcgaaatgtttggaaatcttcggagcatgctcagcgatctggtcaattatcaccatgtttgcccatggaataccgcaaatacgggcattg
PCR verification status
Line verified as correct.