Fly Enhancers @ Stark Lab

ID	Coordinates*	Neighboring genes	Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16)	Strongest annotations	Order
VT48943	chr3R 24414156–24416299 (2143 bp)	MRE23, fkh	active	posterior endoderm AISN, posterior endoderm anlage, posterior midgut anlage	VDRC

Annotations

stage	annotation term	intensity
4-6	posterior endoderm AISN	5
7-8	posterior endoderm anlage	4
7-8	anterior endoderm anlage	3
9-10	ventral nerve cord anlage subset	2
9-10	posterior midgut anlage	4
9-10	foregut anlage	3
11-12	brain primordium broad	2
11-12	ventral nerve cord primordium broad	2
11-12	hindgut proper primordium	3
11-12	malpighian tubule primordium	3
11-12	posterior midgut primordium	2
13-14	lateral epidermis subset	2
13-14	brain broad	2
13-14	hindgut	3
13-14	ventral nerve cord broad	2
13-14	anal pad	4
13-14	midgut subset	2
15-16	midgut chamber	2
15-16	brain broad	1
15-16	hindgut	2
15-16	ventral nerve cord broad	1
15-16	anal pad	2
15-16	posterior ventral nerve cord subset	3

Whole-slide images

All stages Quality: OK

Please, be patient. The images might load slowly.

Neighboring genes

gene ID	gene name	distance	links
FBgn0262741	MRE23	overlapping	BDGP FlyBase
FBgn0000659	fkh	3323bp downstream	BDGP FlyBase iFly
FBgn0263388	CG43440	5054bp upstream	BDGP FlyBase
FBgn0026400	Noa36	9625bp upstream	BDGP FlyBase
FBgn0001215	Hrb98DE	11400bp upstream	BDGP FlyBase

UCSC snapshot

Sequence

tgagtttggggtgtattttgctatggatctatgaatcggtatgcgtatccgtatctgtatctgcggctgcgtgtgtatcttgttctttgtactgcgtgtgccgtaatgagcgtaaccataaaagcgtcttttgttttacgaccgcattgcgcgcgtgtttaccatagaaaacaatgccaattttatggctgccccggccacgcagacaatggcccaaagaaccgcatcccgacagtccagcatccagcgatataggtagtatatagggctccttatgtacctggagccaaaggtgatggcgaaactagagcgaatgggtcgaaagggtgttggcgagcgggacgctgcattaattagaacactgcggatatgtgcatgtatgtatgggtttcaggatcgaaattactttcttcggggccataaagcggctcttatctaaattaggatgttgcttgtttgcggctgtgtctgcacaacatcgccgttttcactatttgcgtaggtgtttcatttccgtttcacaatttatctggcgagtgtgtttgccggcacactcagccgagtagcgcacctttagccgcctcaagattttcctctttccctactttcacatgtgattttccctcgcggccttatcagtttttggcgcgtcagccgtcgtcatcgtgattcacattttttcctccctggccgccgctgtttgcactcgaaacagtgacagtaaccgaaaaatgcacttttaaaagggcccccgtactcggggttcgaatcggacgatgcagtttgagaatcgagggaatttggcgcatttggggtgcgtgccttatcgctggggagcccatggggctacgactctagatatcgcataaatcagagcctagtcgcgcttttgcttgattatttccattttatctatttggctgcgggtggctataaagtttctggtttttatctttgtgcaaacacgggaaagcagtgatattaaggccctggcgaccttatttccaccggccaccaagaaaacagcgaattctattcttttaattaggaatccgcagaagaggtggaacccctcaaaggcaacccaaacagaggaatttcattttaatttgtagggtaaatagaaaatagacgccatcttttaaattatgtaagaattttttcaaaaccaaaatagaagttaataagtgccactgtttgactttaattaattattacttataattatttatttctgaactccagtaatcttatgcaaatatttaatataagaatacattgtagttaaaataggtaccactttggccgattgttcctaatttgtttatcctaatttcacagcaaattttttaacccatgtttatccgatcttaagtaattttccaaacaaattatattttggctcgaatcgctccaatcgatatagttgattagaaccccgagagccggttttctcccaccaaaccagtttatgcaaccccaaactttagctgggatttcgagagtgaccaccaccatattgatcatgcgaaagaatgttttgttcagctcccgtccgaagatacagatttcttctatccactcctctcaaaatacccatgcaacttagcaccaggctgctaattacatattcgttgcctgaaaaattaactttccagcggcgaacattgtagcatgccagtggcgacaacgagactgctgccagttttataaagtccccgctgtgttttttatctacctatctgactatccgactatctaactatctaacaatatgttatgaactgagcctgggcccagaagccgcccatttcaatgacgagcgttgcgttgcggcagccgaaaagctgtcaaattgtcgaaaaaattattgttatcttgctgcgcgttattgagtggccgtgttcacacgcagctccagctcaagatacagatacagctacaaagatacatttgtatctacacatgtccgtacaaacaattcaattaattgttgtagagcggaatatgtcacatcggagggatatggatggctagctttggactgggcatatagttttttttttcgggggggctgtaagcccaaactcttcggtagtttattgatttacaagctggggcccccgtatcgcagatagatgcag

PCR verification status

Line verified as correct.

No slide loaded.