| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT4905 | chr2L 9690561–9692656 (2095 bp) | Pka-C1, hoip |
      active |
ventral ectoderm AISN, A-P stripes, head subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | ubiquitous | 2 |
| 4-6 | ventral ectoderm AISN | 3 |
| 7-8 | ubiquitous | 2 |
| 7-8 | A-P stripes | 3 |
| 9-10 | head subset | 3 |
| 9-10 | lateral epidermis anlage subset | 2 |
| 9-10 | ubiquitous | 3 |
| 9-10 | ventral nerve cord anlage subset | 3 |
| 11-12 | head subset | 3 |
| 11-12 | lateral epidermis primordium subset | 3 |
| 11-12 | ventral midline | 2 |
| 11-12 | ubiquitous | 2 |
| 11-12 | crystal cell primordium | 3 |
| 13-14 | ventral midline | 2 |
| 13-14 | ubiquitous | 2 |
| 13-14 | dorsal epidermis subset | 2 |
| 13-14 | crystal cell | 3 |
| 15-16 | lateral epidermis subset | 3 |
| 15-16 | ubiquitous | 2 |
| 15-16 | crystal cell | 3 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0000273 | Pka-C1 | overlapping | BDGP FlyBase iFly |
| FBgn0015393 | hoip | 9230bp upstream | BDGP FlyBase |
| FBgn0011207 | pelo | 10249bp upstream | BDGP FlyBase iFly |
| FBgn0051710 | CG31710 | 11881bp upstream | BDGP FlyBase |
| FBgn0032138 | CG4364 | 18360bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
gtgagcgaagggaaaaccagagacctgggtggcaaataaaagaatattcatttatttgcggctgcctatagcacctggccccacctccaccgcctcctccaccgctccacgccccttcgagagccgccctctttcaatgtcaggctagcaaaagtaacaacaacaacaattattattgattacatgtcagttgtattgagtttgcgggaaaaaggcagtagtccctgcctacctaccacgtgtccccgtctatctaattgtattcctctgcctgttttttatcaaattcaattagacgcacgactataactgtaattgtgtgttagccgtcagatagaaaatgtatatacacttacgtataaaaaggggtacagatgtggagtcaataaagcgtttgttattttattgtctttgttatcaggacacatgaaaaatggaaatgcaccgatggtgatggtgatgatgatgatgtaactgacaaaaaaattggagcaaaactcatttccatgctcaaatggggtgcatattcttaacccattttcacagtaaaccaaacaaaacaaattaaaaagcagtaagcaaaataaaaataggctgagaaacttcgggggaaaagttgaaaaaactatgagtcggggtagccgcataaatatgaatctaataactctctttgtttgctctatctcgtcttggctcttatcgcttagcattcgccagctgttgtttggttttagcctgcggccaagttttgttttagttttctagcccattgtcagcagcaacaacctcactctcatatgacaactggcgtcaataggttttctttatttattattattatttttttcttaacgattccatgctgataagccctcaagggggcagcactcgtcgatgtcggtttgttgtgcctcccattttaaaatgtgttatcatcgaaaagtgtggagaactacacacgtacacacgtacatatccctagattaaattgaatcaatgaattttaattcgcagaaattcgatagcaaacaaaagagaagcatgtttgatgtattgtacaatgggcatataaactagttatcctgcactttattcgtttatttcgttgtcgcgtctgaaatttttgcatgaagtcattcctcaccgtcgtcgaatgcatgtgtacacataacacctgcccataaataacgggcggtaaacaacggggaacggaataaaaacgaaaactaaaacggaaaatttcaattttcattgtgcagcgtttttccatgttcaattctattttatttgcccataaatacggaatgaaaattgctggttactgtgcgggacagtcaggcagataggtagatagatagatagatagaatgggggttgctggaaaagtcagcgtttatctcacagatacacaccgcataagaacgtgaaattgcatatacttcgaccattagatgcgctttgctcaagtggaaagatgtgataaggaaaacccgtttcgtttgcacttgagcaaaggctttaatgaaccttttgtgtattatcatagaaaaatacactaatctccaacactggaactaataagttaacacgtcttttccaaacgtaacgaaaagatatttcaaattaaagaaagcaacaatgttgctcaagtgaaaaaaaatcacaatatgctctggtatttatttatatagttttgattagtttgtcttaggaggaaactgttcccatttgagtcgaatgcacatttagaataaaacaactagtgtacaaataaacaaacaatcggaatacgataccaataaaagaaaatgaaaacaactgcttgggtggctaagataatggcgggcagcaagtaagatcgcctgatcccgatcgagaacatatactttatggggtcgccgcgagcacaaaatgccctcgcattccactagaacgcgttctagggaaagagtagcgaaaatacaacagcgactacaattttgaaagcaacaacgacaacgaaaataattgcacaaatgaaactgagggaggggggaaaaaaagacgcgaaaaagcaaaaaattaaaacgagcacaacatggcgagcaaaacgaagc
PCR verification status
Line was not verified.