| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT49239 | chr3R 25002223–25004613 (2390 bp) | CG14509, CG11898 |
      active |
amnioserosa, midgut chamber, ventral nerve cord subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | not active | 0 |
| 11-12 | brain primordium subset | 1 |
| 11-12 | ventral nerve cord primordium subset | 1 |
| 13-14 | ventral nerve cord subset | 2 |
| 13-14 | amnioserosa | 3 |
| 13-14 | brain subset | 1 |
| 13-14 | midgut subset | 2 |
| 15-16 | ventral nerve cord subset | 1 |
| 15-16 | amnioserosa | 3 |
| 15-16 | midgut chamber | 3 |
| 15-16 | brain subset | 1 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0039647 | CG14509 | overlapping | BDGP FlyBase |
| FBgn0039645 | CG11898 | 4994bp downstream | BDGP FlyBase |
| FBgn0039644 | CG11897 | 11536bp downstream | BDGP FlyBase |
| FBgn0028692 | Rpn2 | 19247bp downstream | BDGP FlyBase |
| FBgn0039648 | CG14515 | 21055bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
ttggaggaggtgctgaccatcgactggggggcatggaatacaaacctgtcttacctagcgacggattgggggagtggggccgcagggaggccatgctgggctgacgagatggcgctcgcaccgacatcctggaccctcggcgctcctggccgtggagcagcttgctgtcccgcagcagggagacgttcatcaggcgaggattgggcgtgttgaagatggttcggttctcacgccagcgagctctgcaaattacggccatgaattagtcacatttcacggaacccacggatcatattatccggttgatgcgggctgggcaagcggtggtgcacgagtaatggtgcgggaatatgggggccatggttactccagcttaatgccaattaatgcagaaacgctgtttattagactggaaattaattggtgctcgagttatgtatctagccagccacaaattaaggaagccccatcaaagcatcgacaggccaattgacccagtttattgacaagccaacggatgagatggttgagctgagtgaaaggagtcttaaggatctttgatttgcaccatatgatgatgtcattacatctagtgaaggcaagagatttgttgtggagcaagggagagtaatagttcattaattggaacttttaataatatatttttctttagaacttcttgggttcgtttcaagggtctaagcaaatgtactttcattttgaaatggcttcctagattatgggtgcactcaagcgattcgatcgatgcctcaaatggtgtgtgactgttgacccagattgaaggcttaaactatttgcgtgggtgtgcgggtgcgggggatggagatgaatatggagatggagatgtttgcattgcaatttactcactggctaaacaatcgcaggacgacacaaataataacaaacatcaatgccattcctaccagcacgccaatcatggccgggtcgatgtaggtctcgggtcccctcttgtcctggcgccctgcaaacagccgaatggcaaaaggacaacaaacaacacagccccattaaccataagcagtgccggcttaaatctacgcgcttcttaaccaccgacctttgcactccacggatccgtccttgccccaaatgggtgacatctcgaaccggcagatgcagcgtccatcgcggcactccgtctggaagtatctcatctcgcactgctcgttaaagaagcaggactcgttcacggcggcctctgcggcatcaggattgcgggtgaaacagaaaggacaccaaaacgaaatcagttaagctgacaaagggtcaacatgcagtcgcgcaaaatataaacaatagcttaagtctataaagtatttataaagcaatttcttgctcctgacgatatggtaatagctgttggtaagtattgaagaatttattaagtattcaagagcatgacccagctaacaccctgatttctttcagtgtccctcaagcaacaggcaacaaacaacaacaggcgatggcccatatcaggaaaaatatttcccggctgtcgcagctgtttgcggattgatttaatggctgattgaagtgcgatatgaccggggcggattgactttccactccgtccactcagtccactcggctgacaaatattatcgtggaacaagaacggaggaggcccggcgattacgcccccgatgcgacgggcagatactcgcctgaggagaagtccactccggagacttctgccttctggcttctgacagacttgatgatggctgtcagccacgttgatgatcaatggccgggagatatttggccgggaattacgattgagtcacgcccataaaaatagatcagcgcctgtcagcggcttggagttcgatccccagccataaatacgcattcgaagtgtccgccgttgcgatttgaatttatagtatcgcacgtgtggcatgggggaatatcaattgtgattatgtcaaatgtgcattagttgcaactctcacaagtctctaatgcggctgccaagtttctattttaatttacagattttctaagaccgcaatcagaaaattccagctttcttgactctttttcaatgagaacttggcagggtgacagctcggaaaaacggatggaagtaatgggcttgcagtaatgactaccacctacctttgccacatttgtcatagtgattggtgacgggcagatcctcggtgcactggcaggacttcttcttgggatcgcagatggagccggggaagccgcattccagggtattatcgcacttgtcgccgaacttcttctgcccacgactggcataatctgcgggcgaaaaaaaaaggatgtggataggatatatatatttcatgacaacaacgtgactaatcccaggcg
PCR verification status
Line verified as correct.