| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT49279 | chr3R 25088511–25090669 (2158 bp) | stg, SP1029 |
      active |
procephalic ectoderm anlage, anterior endoderm anlage, tracheal system anlage | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | procephalic ectoderm AISN | 3 |
| 7-8 | posterior endoderm anlage | 2 |
| 7-8 | procephalic ectoderm anlage | 4 |
| 7-8 | anterior endoderm anlage | 4 |
| 9-10 | head subset | 3 |
| 9-10 | tracheal system anlage | 4 |
| 9-10 | anterior endoderm anlage | 4 |
| 11-12 | head subset | 3 |
| 11-12 | tracheal system primordium broad | 4 |
| 13-14 | head subset | 3 |
| 13-14 | tracheal system broad | 3 |
| 15-16 | not active | 0 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0003525 | stg | 6990bp downstream | BDGP FlyBase iFly |
| FBgn0263236 | SP1029 | 12339bp downstream | BDGP FlyBase |
| FBgn0051445 | CG31445 | 17963bp downstream | BDGP FlyBase |
| FBgn0051427 | CG31427 | 22427bp downstream | BDGP FlyBase |
| FBgn0039656 | CG11951 | 24086bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
ggagttggtcccgtcatcttggttcctttctttttttctgatacttgtcagcgcctgccgtttggcacacaaatgaagtcattgtcagcagttgtcaatgcagccacgcccacggccgccacccgcccacttagtgcgtacatagatgaaaattcgaaaaaattttaaaaataattcccaaattatggttaaaaatgcttgtggcggcaaaacaatctgagctgccactgagagcgggaaaaggttttcttgttttatttagagggtttacggactcctaaaaggagtgtccgccgatccagcccataattaactattcaaacaatgggcacgcacaaagggatcagcaatcaaatacgcatacacacactcggaacttggtatttcgagtcacgtttgctgacacaaatccttcttaggaaaggcaatatttcctagtcattgcccatgatcaactcaaacatcatcatcatcagcagcaacctgagccacctgaagatgcgcacagtgctgctcggctgtgatttcaaaaactagccaatttagtttggaaaatagctaaagtatataaaaaaccttgtgagaatgataaattcctgtttaggatctggatctatcactataaatgccaagttgttcataagctaaatatatataagtatatatcagatggttataccaaaagaacagtcaaaccaaagacactagaaatacagtcgaagatccttgagctggctatagcttggctataaatcagccaatttggcatcgttggatgggaaaccttattgacaggtcccccgaaccgtgcataccaaagcagattgcgcagatttcaaaaatgttagaaacgagaagacagccacaacaacaccgctgatttcgggtacgtgagtttgtctacctattgttcggatcggatcggatggaatgggatgggatgggatgtcggggcttgtagctgcaacctgttccgtgcattcggcataaggtgttcccttcctcccgcgatcacacctatgtatcgcctggtattatacccatgcccatgtccatccgatgcgagccgagttcccagcgtgtgtgtgtcgcttgccgagcatcagcccaagtcagcagtccaagacagcagtatatccattccaagtccatatagccttgacagccctggctcataattcactcactgcaggtttgaatttctacaaaaataacttcgtttgcatggcattggcatgtctgggattgccgctcattcgccgcttttggcatgtctttggggatccgatataaagaatatctccacatgaaggtatctacaatctgcacagagtcatgtgtgcatagttctctgccctgaatgcttaggtattctatggatatcaaattcaaaaggggagatttatggggactttggttggattgcagaggatctgaatagtacttcattaagaaaaggtataacttgattgtattatgatattttttaaggtatgaacatgttcgatatctacaccaagatttttctatggcattattttgtgtaatgtatttaaatataaattacccacgtttccttccttcctcaatttaaatacgaaatttacacgtctcacctcacgcccactgaagtaaacaaacgcgagcccagtgatctgcacttttgggaaatcctttcaatttggcacgtgggccggatacaattttcatcgcaaattgccatggaaatcggcgggcacgtactacgctgcattttccaatggaaaaccctgcctctaccattcttgtcccgcatgaaatgtatttattcttgacaaaatacattattgttaatatgcaccgcgctcaataaggtcccttttgtgagctcgaggctcgaaaggatatgcgattgtatttgcattaaagtggcattgttagagggccggcatgaggatatcaaactcagaatgtgtagagggtgtgtatgcgccagcagatccttttgtcaggccaaatgcgcgaaagtgtggcgcaggcgcagcaggatcctggatttggatcagcttcagctacaaaatcaggacactgcgcacgtgcgttgggaagtcctgtacgcgaaatgggaagcgttcacccccgggctggaaaatgaaaacaagtgaacgccatttccgcac
PCR verification status
Line verified as correct.