Fly Enhancers @ Stark Lab

ID	Coordinates*	Neighboring genes	Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16)	Strongest annotations	Order
VT49282	chr3R 25093709–25095841 (2132 bp)	stg, SP1029	active	brain anlage subset, ventral nerve cord anlage subset, lateral epidermis primordium subset	VDRC

Annotations

stage	annotation term	intensity
4-6	not active	0
7-8	not active	0
9-10	brain anlage subset	2
9-10	ventral nerve cord anlage subset	2
11-12	lateral epidermis primordium subset	2
11-12	brain primordium subset	2
11-12	ventral epidermis primordium subset	2
11-12	ventral nerve cord primordium subset	2
13-14	brain broad	2
13-14	trunk epidermis subset	2
15-16	brain broad	1

Whole-slide images

All stages Quality: OK

All stages Quality: OK

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Neighboring genes

gene ID	gene name	distance	links
FBgn0003525	stg	12188bp downstream	BDGP FlyBase iFly
FBgn0263236	SP1029	17537bp downstream	BDGP FlyBase
FBgn0051445	CG31445	23161bp downstream	BDGP FlyBase
FBgn0039659	CG14506	25756bp upstream	BDGP FlyBase
FBgn0051427	CG31427	27625bp downstream	BDGP FlyBase

UCSC snapshot

Sequence

acgacgaggtgttggaatgttggctttataagccacttccttgtgttatatatcaatctaaatatagatcggcggcatagtttgtctaatgccccattgcttatatagcgtgtaatggatttctgggaagtttgtgtctgttttttatatcaccactgatacggggtgttcgtggcacgctctaaggaagttcaacgaactgtttgctttgctgtccctaacctaagacatttgcaagataagtgccccacatatgtatgagctgctcggaataatttcatttcatttccaccccgacttttccaatacaacccccctcccccccccaacacacatacacaccacgccgaattctccgctctaacggaaccgctgcattttcagcagcatattaattacacttggggtcattgtcacgccgccagtttcatttatttatgtagcagactcggcgcataaatgtcggcaactgtcttctcccccccttgggtatttagaccctcacccactgctaccttttctggaactgctcctccaaattttcgggcatagtttgttttgggtgttggcgggcagagaaagtgagtgccctggatgaatggagaagtatttataagaaataaggatgttaccaaaccaagttatgaaactcttgatatggcacagggatctgtagtaacatgaacatctaagcattgctatgaatacaaaatgtaacacctcatcaatattcctgaaagtgcagggaactagtagtccatcgatcgggtggtgatggtggaattggcggtgctttgctgcacatacgagtacgtctcgagtcgaatcctcggatcaagttgaaccctccgccctgacgagcaactgaggaattcaggaactcaggaacttaggaactcaggaactcaggaacttaggaactgccttcgagcagctgctccttgtggctcagacttggagagttttccccgagacagcgaggctgttgccgagtccctgctttcggttttggttttgcttttggccccttgccacgattcattaaatttttgcttcatttcaaatgcgattgcatggctctttcggtcttgcgtgtgcgtgtgtgtccttgccattgccgctgtgtgagtgcaaggagcaggattaccgatgggcgatcgaggtggcatatgcgtttcttggcgcgagctatgtggcaaatgcacacgcaaggaagcgagctcagccagccgagcgaatcgaggaagcaaagcggcaaaaaaggaaggaagcacgaaagcagcaagatgcactgcgagaaaagcatttaatattatgactatggcttttaaattagataagcttaggcaaaggtattttgatttgaagggattcttgattcttaaccgaagcacttgaacttgtgaattaaatatagttattaagataaaagtaaaagaacgttagtggagagcgtccttagttgttcctttgctaaaaatctcagatgatagcctcttttcgctcagtgtgggaaacggaagggcggcaataaggcacacacaaaactagggagaagtagaaatggcataatgaaaagttttgcccatggggtgacgacgggcttctccgcctcccgtttctgctttttccaggagcaggagcagcagcaggatctgccactaaaggatcagtggcaatggcaaacgcagccggtggtgctttttgttcttatgatttttttttttggtgtagaaatgcgcgcaaaatgcaaaaatctcagacgcacaaaaaaccccaatcaaaagtgcaaggcaatcggagtgtgtgaaaaaatatgcaaaaataatgcgcttgatataaacacaagaagacacacacacgcacacagttgccaggacataaataagtgaaacattttccccccacccgacggaggcaatcgagatcctcgatcgctcgaggtccttggcactgcagctgcagctgggctgtggctgtggctgcaaaatgtgaggaaaatgaaatgaaaatgatgaagctgcaacaatgctcgatctgccggctggctgtcacttggataatctagaggaatacccggccgcttgtcccgtgccaagacattcgctccatccccctgctttcctccaaatc

PCR verification status

Line verified as correct.

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