| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT49340 | chr3R 25196738–25198875 (2137 bp) | Ptp99A, Cnx99A |
      active |
brain broad, brain anlage subset, brain primordium subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | brain anlage subset | 2 |
| 11-12 | brain primordium subset | 2 |
| 11-12 | ventral nerve cord primordium subset | 1 |
| 13-14 | ventral nerve cord subset | 2 |
| 13-14 | brain broad | 3 |
| 15-16 | brain subset | 2 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0004369 | Ptp99A | 6630bp upstream | BDGP FlyBase |
| FBgn0015622 | Cnx99A | 51373bp downstream | BDGP FlyBase iFly |
| FBgn0039659 | CG14506 | 73837bp downstream | BDGP FlyBase |
| FBgn0264792 | CR44022 | 87763bp upstream | BDGP FlyBase |
| FBgn0039663 | CG2321 | 113767bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
taaggcgacacacactaaaagcccggccccgttatcccgcctgcactcgcacacacacacacaagcacaagtacatgtatgttatgcaattataacttttgtcgttagcaactttaagcaactttaaacgtaaattgccgtcgtgaagtagcttttggcgcacgctctcaagcgccgccattcacacacacacacacaccacacatacacactcatagacacacttatgcacacacacacacacaggaggttatagtttgttgtcggctttggagcaaagtgtgtgaaaggtgttttattgaattaagtaggtttaacgggatttctataatgccagcgacagtcggcagagctgcatatgtatttattgtaactacagttgctagttttgcagcccggaaaaatcgcagtcagtttgctggcacggaaactgtggcactttcggttaaacttttgcgtatgtaatgcatatttcatttaatttttaagagttgccaaaccgaaaaatgtgcaaatgatggcgagttttgggtccgaaagttgtaaattgcctggcagcagtcaagtggctcggagtaattatgcaaatcaagctgaggtgttgccaaattccgacaatagatacgagacgtattagctaatcagccaagttagtcgaagttcgggcaacttgaccacagctacacttccgaccataaacgtgtgggcattgcagttataattaatggcaaatgccttccccatttccctatggcttttcgcccaaaaaggatcgagcgtgctgcatgcaaaactcatttccactcgaaagcctgcttcactgcagttatttctcatgtttccagccgcacttgattgccttcaacgttttttttttcttgtttttgctttttaggggacatgcaagggtttaatgttcgcattaggtccatttacattcgtatgtcgtgttcttattttgtacacaatgcgggttaccagcgtttttagttttaaatatcttttaaatattaataagccatttaactgccacaacacgttgatgcatggtgctcaattaggctgcaaatagctcgaaattgtttgcttaataaacgtcattcatcaaatcgacacgtacttttttttttccttttcgacgcttcgacagccggcaaacacgcaaagttcgtgtcgattgaacccaaaaaaaatgcaggtcagtggggtcaaggggcgtggcaggtccttgacagctggccaagtaaacgaaacactttcggcaagtgcctggctaagtgaattaatgttggctcaattgtgccacaagttttattaattttctgccgccgtgatcgcgcatcaaaggcaacctaatttgccacatgccgcggatctctcgaggattcccattcaatgcaatattctcctctgtttgcattggcacttagcatcgcaattgacgtcccgtctgcactgcacccttgtcgtccttataaaaaacaatataaatattaatgctatttgcgtaacaattcaattcgaacgagagggttggaagatcggccttcggggtgaggggaggaaacacttggtcgcttcacacgaacttcactctgaaagcgggaaaatgggaaaacgagccaacggggtgttgcatattaatcacaggcactgtccgaggtagaaatgccttatatatcagtcgccataaattcacaagcaatctgcactgagagaagttactcaagccattaggccattagtttttcaagtggggttctctgtttctgtaggccttaagtcagttcaaaaaggtatgactttatatttgaaatgaacgtatgttaaaatcatcttcgaaaagccatagataagataacagaaaatcaaatttgtgatcctgaactcttaaatatattcaccttattctaactgcacgtttttcgcagtgcaagcggcggaaaaagtgcgtatgtcctttgaggagcccggagtgcaactcgatgggcggcttaactgccaagggttgcactcgttttaggttgtaagccgatggaaatactttaatccacttcacagtgacaccgaaattaaaacatacaaacggagccgtaaacaaccccgaaattgtggcaaaacgggaaagaatcactggt
PCR verification status
Line verified as correct.