Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT49363 chr3R 25237305–25239500 (2195 bp) Ptp99A, CR44022 activityactivityactivityactivityactivityactivity
active
ventral ectoderm anlage, gap, posterior VDRC

Annotations

stageannotation termintensity
4-6gap3
4-6posterior3
7-8ventral ectoderm anlage3
7-8anterior endoderm anlage3
9-10ventral ectoderm anlage4
9-10anterior endoderm anlage3
11-12not active0
13-14not active0
15-16not active0

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0004369Ptp99Aoverlapping BDGP FlyBase
FBgn0264792CR4402247196bp upstream BDGP FlyBase
FBgn0039663CG232173200bp upstream BDGP FlyBase
FBgn0039664CG200677885bp upstream BDGP FlyBase
FBgn0040623Spase1278961bp upstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

aactcatatagatcacgtttaaaagcggggcgtaaaaggaaataacgagcagcatccacattgctaattactttctcattatgcaggctatttagctttaattacactaagctccaagccacgacacacagacgcacacactcacagcctggcaggacacccctcacacacacacacactcacgggcacagaatcactcacaaatacaaggacacgtggagagcacttctaaactagcaaaaaagcgctcaaatgctcgaaattcgccggccaaaagtggcaacagcatttgagcctttcacttttcacctggcgaggcttacggccctcggcttaaccgctggcaattccaatttacagcgcaaaatgtgcagaattttccatttgaattttgggtctgggcaaagcggacgaacctggtcgccgtttgccccgaaagggaaacgctcttgtgcgccaaattgctggcttacggctgcgaaacacaaggaatacgcctgcaatacatacacactgggcgcgaaaagtatgcggccataatgaggcaagctggatacatccagtgtgttctttacgatcaattttcaggctttcaatccggtttcagttcgccggggctcggttaattatatcaatttaacaaaggggcctgcaagtgagctttccgcacacacctggtctgcggcgaactctttaaagcatcaatataaaagtgcactaaaaaaaatcgaatgtattgaaaatattccttcaagtattaaatatatttcaaatcttaagacaaatagcatagcatagctttaaacacacttctaaaacttaaatttgaactttaaattgtactttaaagtgccaggtatttaaactttcgactgctgaacaattttgtttacttttccgccgtgcatgtgtgggatgcttccgttggtttatttgcattttaatatgcctcgtattttatggggctttcatattgttgttggtatttataatatattttcccttaagccgcatttgtgtaatgaaacggaagggattaccgctggccgccgactgtcggttgctccgcaacccgcagtccgccgtccgcagtccaccgtccgcatccttgaaccacccacgcagtggagatgtgacccaaaaccccgtacacgttaacccttaacccgcgcccatcttttggctcgaagtttaacgaaattgaaacacatttgcctgacagttgccatcagcttggcttcaattcgatgtcagcattattgactgatcctgggtgccttgaagggcttctttctactcacgaccggatcgcctgtacatatgtttacccaaggctgaaacacttcaagttgcctagttaaagttaagtgtgcgtgggtgggcgtggccctgctcaatcatatttcacattcgccacttgtcagcttttatctcgttttcgtcatcccaagaagtgcccatcttatattccagaatttttcccgacccccgacgcttgtcataatttcattatttgctgcgttcaggcataaaaaagggatattgtctggctgcctgcgatgaatgtgtgtgtgagtgtggtgtgtgtgtgtgtgtgcgtgagagtgtatgcgtggccgggttgtcatgagcacgatgctgctcgcatgtcctttccatcgatgtctgcacacgcctttattgctcggcttctgtggcagtcggcggccatcgcaggatgacagcaaaatgtctatacaaacagcagacaggacgacagacgggcggatgggcggccaaacacagatacgcactcacactgctattaaatatttttcataggaaatttcaaatgaattcgttttgaatgatactggaaaatatgaacattttcagctatatctatacaaaagaatcttacaaggacaccatagataataagattccaagaatcttttcaaattcattcctcttttacaataattccagtgaatttgtgaacctttttttttcagtgcccccatgcgtggcacatccttttccaaccgactgactgactggccacgtgcctcaagttatgagcctcgactcgtcctggccgtggagttgccagcccagccaagtgttgtccagcactcgagcaaccaaaacttcaattttaattggataattactcatccaatccgggatttaataccgcctgaagttgatgcaccg

PCR verification status

Line verified as correct.

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