ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
---|---|---|---|---|---|
VT49502 | chr3R 25491743–25493750 (2007 bp) | ppk21, ppk20 |
active |
procephalic ectoderm AISN, procephalic ectoderm anlage, ventral epidermis anlage subset | VDRC |
Annotations
stage | annotation term | intensity |
---|---|---|
4-6 | procephalic ectoderm AISN | 3 |
7-8 | procephalic ectoderm anlage | 3 |
9-10 | ventral epidermis anlage subset | 3 |
9-10 | brain anlage broad | 3 |
11-12 | brain primordium subset | 3 |
11-12 | ventral epidermis primordium subset | 3 |
13-14 | brain subset | 3 |
15-16 | not active | 0 |
Whole-slide images
Neighboring genes
gene ID | gene name | distance | links |
---|---|---|---|
FBgn0039675 | ppk21 | overlapping | BDGP FlyBase |
FBgn0039676 | ppk20 | 793bp upstream | BDGP FlyBase |
FBgn0039677 | ppk30 | 3128bp upstream | BDGP FlyBase |
FBgn0039678 | Obp99a | 5636bp upstream | BDGP FlyBase |
FBgn0266137 | Dop1R2 | 6038bp downstream | BDGP FlyBase |
Sequence
tgtgcaagtgctctccctcgatcttttttcccatctcagataaaggtaacttaagatctactgcagatacataattctatatatatttctcttcacagataactttactgcatgcaaagcctcagacttcaagtgtctatacgacaacagatgtaagatatcccttcaaggacatttcatgtcaaataatttaaaccttttccaaatagttacctttagcattgaacggcatcccgaggaggacgattttgttaaaaatccttttaaggaaagcatgatctgcgactgcttcaccagctgcagtcagctggttttcgaccgggttttcactactaccacgcttgagtaagtgaatcctatgtgtgtaatccactgcaatttctttaacaatttaaaaaatcctgtgcagtaataatgaaacggacacagaggcgggcacaatgcgcttagatattttctaccaatccggttggtttatccaataccaaaccaacatgagatttacctttgtggaactactaggttggctatacttatctaataaagtatcatcttaaatttttattttatcatttcagctagctttggtggcataatcggactgtttttgggagcctccttactgagtgcctttgagttggcctactacttctccatcggcctctatttgtacattcatggcaagagaaagttaagaaaaccagaacccggcgtattaactattcaatttggccagagaaaaataacaccaattaaattttgacattaaacatttaataaatacagcatatcattaccacacattctttctgtagttaaaaggatgcctcaatttcctgtcattggtatccttgtgggcagcgggattctcagccagatggccaacttcgttccttaggtagccctttaaattgacccacttagccttcaggtgcttaaataagaccccatagtactggtggtcatatagatgcatagcaagtcccacagtaaggtagtagatcaactcgaaggcactgaccatagaagcacccaagcaaagtccaaagattccacccagattggctgcgaatatacgagatatatgagtggttcgccatgctgaatctcttaccaattagatcgataatggtaaactccaggcttgtgcgatacaaaggtgtggtctccacttggtagtgcacatccaccctgaagagtttctgatgcggatccttgggtctgcaaagaatggtttcagatatctcaagaaatcaaagaagggttccattcaagtttcatacagtttatgggctgacaaaggcagtgtggtggtggaagtataatagtcgagcaggtagcagtccaccaagcaggaacaggtcattcccagcttggtggcactgaaaagggcatcctcgtcccttcgcttgtcgtagctgaagatgtctgcaacagatgggttttatttccagaattaatttattcccttatatgtatctcctaccattgtgacgcgcaaggcagcgcaggctgactgcgttgcaatccggaactgaaagaaaatattgggactatattatataataatcacatcataatcatattatattttttaagaaaagagtaattagacttacctctgtggttgtacaggaagaaaatgggcaaggagcagttgcagagctgaattaggtaggactcatggcagcggttgagacagttggagagctggaagggctttccaaagttcttggccgaatcgttggcgtccagttcgccctgctcgtccgcgaagaggcagttcctgcgctccggcgggatactgcgcgtggtgttatccgtccaagtgagacccggacggacagtcacgtaggtctccgtgttttgggttattgaatatacgacattgttcagttggtcgggcttcttaatcataacctgaaaatggtttaatctagtaatattctacggcctggcagatacttacgtagacattattattcgcctgcgaatcgggtcgcctgaa
PCR verification status
Line verified as correct.