| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT49719 | chr3R 25889186–25891462 (2276 bp) | sima, CG34317 |
      active |
anterior endoderm AISN, anterior endoderm anlage, procephalic ectoderm anlage | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | posterior endoderm AISN | 1 |
| 4-6 | anterior endoderm AISN | 4 |
| 7-8 | posterior endoderm anlage | 1 |
| 7-8 | procephalic ectoderm anlage | 3 |
| 7-8 | anterior endoderm anlage | 4 |
| 9-10 | not active | 0 |
| 11-12 | amnioserosa | 2 |
| 11-12 | ventral nerve cord primordium subset | 2 |
| 13-14 | yolk | 3 |
| 15-16 | head subset | 3 |
| 15-16 | lateral epidermis subset | 3 |
| 15-16 | dorsal epidermis subset | 3 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0266411 | sima | overlapping | BDGP FlyBase |
| FBgn0085346 | CG34317 | 5334bp downstream | BDGP FlyBase |
| FBgn0260468 | CG7950 | 5334bp downstream | BDGP FlyBase |
| FBgn0039744 | CG15526 | 6862bp downstream | BDGP FlyBase |
| FBgn0003479 | spn-A | 7428bp downstream | BDGP FlyBase iFly |
UCSC snapshot
Sequence
ctactgctatggctacgcgcccacgaacactcaaccttgccagttctcccagtttgtcgacatcgaggatttcatgtgagtgacgaccaaagtggttggtcaatttgttgttttgggtaattctgtgattttgcgtttttcacgaagggtattccttaatctcattatcaaatagtattcaagtacgaatatttacacaattttgcttaataattgttgttacataactgtggagagctctagctcattcaagtaaacaaaacaaaaaccagttagaatcggtggccgaatgccgctagcgatttacattttcctggaggcacctgaacgagctgagctcctagaaaattggccgtgttccattgtaaaacccgagccgaaagcaaacggcgctgcacttatctatgcttatttgtgaatcgcttttataataatatttagatacgcagcaaaagatagggcgagggggacggaactatggcgcgagagaggtgtcgtatgagtcaaggttcggtgggttattcccaagagaggtaccgtttataagattgtgggctggaaaagactttttctctcacttcgattgttgcgtggaaatagtaaattgcttgtcagttgtgctgttgtgtaattgttatctgccgccgatgattttatgtggggtatttcccaaggagttatcgttaggggtctgctgaaggtttcacaatccatctggttgatgtatacgattatctggcgattgacgcagattacagcccctttccctggacttcacctccttgaaaactttgcatgcaacgtgcgcagcaagcaaatgttttcgtaatggtagtcggatttggtttatttacgttttgcacacgtttaagccaaattcggctggcccatctccatgctaatgagccgaaaccaaactgacgcaattgcaggacggcgctgcccgaagaactccacccacaatatggtgctcccaagaagagaccaaacatccctgacccgctgttgcgcctcgatttactgtcccatgaacttggcattagcacttcgagtcgtattttatgtgttttcgctgatatctcgcccggagatacggcgcacttggaggtagcttggccaacatttcgcaatgctcgcaattcaaactcaaacaacagcgggtcagtatcctaaggtgttgtcggataagccagcaggacttagatggccacgtgcggcgatcgtggtgtttgcatattcaaactcatttcatacacaaagtgcggaaaatggtatcttaagatcagcatactacatcattataatcatcatacggaagggtagtacacatattaaggtgtgctttcaatattatagcttaattttgttcagtgttttgagctgctttggagcggaaatacttagcaacaacaacagcagcagcaccagcggcaataacaaggcaattctgctggcgcaggcagaatatttaacatgccgtacttgcctctgttctaatgaacagacaatggggccgatcgaaaatatatatatgtatgtgcatacctcccaaaccaaaaccccacccccccggcgaatatcccaccatttaagcaggccattagcatgcaattcaaagtcactctccgccgctttctatgggccacgagctagcaactatcggatttgtgtttattaatgcatatataatatatatagaaatccacgggtctacgcctatattagtattcactttgctggcgaagtaatataatactatataataattatttgagcagccattcgagtttcgcttcaaactttggtttccatccatcagttggttgattgacaatgaaaagccctcttatctaaactggtttctgttttatttatttttgatttatttgaatgcattgtttcttcactttcacagagtttcctaatcaacgttttatctgggcgttcagaatactcttttaataatagaaattctttcgagtgcaaagtcaagtttagcatttgtttatgttaagatttcctctgtttacaatcgatcgattagtggggtcctatctcatatttaaatatgtcataatagaagattatgttcaacaactaagtagtttgcttcgatttattcaatttatttacttacagtaaaagaaaacgggaatactgtttttaatagatacttaagccattattagacaggcggcagactgacaatagatcatattgtactgtgactttgtcggctgatatgatggacttttgatgattgcgactcctccgttg
PCR verification status
Line verified as correct.