| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT5009 | chr2L 9878690–9880838 (2148 bp) | nAChRalpha6, CR44701 |
      active |
mesectoderm anlage, head epidermis ventral anlage, brain broad | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | mesectoderm anlage | 2 |
| 9-10 | head epidermis ventral anlage | 2 |
| 11-12 | head subset | 1 |
| 11-12 | ventral midline | 1 |
| 13-14 | not active | 0 |
| 15-16 | brain broad | 2 |
| 15-16 | ventral nerve cord broad | 2 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0032151 | nAChRalpha6 | overlapping | BDGP FlyBase |
| FBgn0265912 | CR44701 | 8349bp upstream | BDGP FlyBase |
| FBgn0029174 | FKBP59 | 9315bp upstream | BDGP FlyBase |
| FBgn0085212 | CG34183 | 11371bp upstream | BDGP FlyBase |
| FBgn0032153 | CG4537 | 12195bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
cctccttagtagcatcgcaggacctcttatataccccttcgataactataagtactgctgtttggatggccgagcgcacaaagtgtgacaaaagtcacttaaagccgccgcagcagccatttcgaatatccgttatgagaacacagggcaaactaaaaaaaaaaaatataataaaggaggaaaaaaatgaaaagaaagcaactaaaataaagggaaatggagatgggaaaactcggtaaggaatatagatccaatgtacagaagagttccaactgaagctactcgaatgtggagagtccctcgagtgatttcctaggcaaaagtttgttttcttttttttactttttccataaatcaaacagttatcgatggccaggaaattagattacttaagattccaaaaaaaaaacatgtctcaccagagtcgggaatttttaaaggtttgaaatcaatccagtttagtttaaagttcaaggcagttttattttaatacattaccaaaaatattaaaatgaaagctataaaaaccaaaatatcctctgtcctattgaatatttcctaattctcctaactttcgaaaaaatcgacccctaatcccttttaaccgctttcactttctccacttctcggcttgcctcataaaatacaccttagagctccgaatccttctcgccgagttccatcaacttaatctacccaaataataccctggggacgggggcctggtataaatgataaaaagagttgagccactgaccaagagacaccgaaaaaaaaggcaacaacgacagccgaaaaaagattcccagtcactcagctagttgagcctttgttgttggttgtcctgtcgatgttgttgttgttgttgttggtgttgctgctttttgcctgttgttggtagacaacgttgttatttatgacaatttcattgtcttgtccacttgctgccctttttatttccgtctttgccttttgcttatttactaccacccataccaatgcacagtcaaacagccgtgcacaccaatacacaggaagcacacacagacgcggggagtgggtgagcgggagttagagagagcgagctggcttttgtgtagcatacttttgtgcgcgcggcgttatcaaacgttttccgcgctgttactctaggaatcggtgtatttttcttcctttttttttttggtgtgctaggacatctttttaaacagctctatccgtgtgtcctgtctggtgtgggtgagtgtgagtgtgtgcggctgttatcagtggcacaggactcaggactctggactcatcggtccattgatggaacatttgagtgagttttcaccaaaactcattttgagcaaaagagagaaatagggactcgaccaactcaacttctgtttacacttggaagagcacggcaaacggagtcctgccaattgttgcaagccctttgttgttgtcttgcgggtgaaagcttgctgaaaaccccagcatacacacgcacaccaatatttatgtataaccaattcgttttgcttccattttatttcattttttttttttttggcagtatttgttcaaaaatttatgaagcttctgctcgggcaaaagtgggttaggaatttatttaattaaccccaagttcctgccaaggaaaagcgccagcaaaaggcagctttcccccttttttctccgcatgacagcaaaattgtcctttaagtgttttatgagtgcggcatgatttcaaatgatttctatttctgtgtggtgtctctgctcgttttttcttcattttttttttttttttgttacgtgctccaattcccacgcacacatacacacaagtagggagaaaaaaaatatggacatgtttaaattgttatttcatttgaaaaggccgctgattgaaataaaaaaacggcagtgaaatctgttgatttagctagcagaataaaacgcatgatacactcactgcttttggattcgttgatgttttcaggttgtggtaaaatgtgatcgaaaggatgattatttttcactgtgtacatagtcatacatacgcaaacgtaacaatggctggcaaaaaaaaatagatggaaaaggggaaaggcaggataagtaaacttgcaacttgtttccgctttcaccacacacacac
PCR verification status
Line verified as correct.