Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT50101 chr3R 26573936–26576036 (2100 bp) CR43238, Npc2h activityactivityactivityactivityactivityactivity
active
head mesoderm anlage, ventral nerve cord subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8head mesoderm anlage3
9-10head mesoderm anlage3
11-12not active0
13-14ventral nerve cord subset3
15-16ventral nerve cord subset3

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0262883CR432381043bp downstream BDGP FlyBase
FBgn0039801Npc2h1925bp downstream BDGP FlyBase
FBgn0039800Npc2g2952bp downstream BDGP FlyBase
FBgn0039799CG155434300bp downstream BDGP FlyBase
FBgn0039798CG1131317050bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

ttcgggtaaccgattcactaagccctcgcctaattcgatttcattaagtagatttagaaaaactctttcatgaattgcagctgatgccaaagctggccatcatttgctggttaaatgtagcttgtgatttggccagatttcagttccactaatgtgaagcccccctcccttttccatcaagtaatcccctatacccctgagattttcctcgaaacgacgccggcgaacttgagcaaatcacctcaaggggccataaaaagcgagcgaatggaaaatacaaataaaaacaagcgccgagcaaaagccgctaccaaaacgaaaaaataatgaacgccggctatactacgagtatacgagtatctctgggtatactcttatatatgtatctgttggatttttatttcttggaataagctggcgagcacacgactaatcttcgtttaatttcatttgcgccaagcaaaccgaaattgaaatagtccacggggtagtggcgggtggaaatacctccgtttgctcggcaaggacaatgtaaggacatttcgtggagcagtgcaacatttcattggctgacgggggagatcaaaagtatgcgacaccgtggcttaattcgattttaacaattgcagccagccaatggcaaatgccaaaggactcgaggtcctgccattccgctcccactgccatctaattgaagcgagcgcgaagatgtcctggagacgcttctccttggggcacataaaattaatccgacgtgtggcgccgcttctttgtcagcgtcctcagcgatttgaatttaaatgtggctcttctttttccactcgcctgtttatttcccctaagccaggcgaaagaaatacaaataaaaagaagtcgagtcaaggaaccttcgcgaattgaattaaacgtgtccttcgcctcgcgacgctcaattttcccttctaggtgtggacaaagggagcctcacaatcatcatcatcagcatctgtgtgtattgaaaattttattgcctggaataattagacgaattaagcacacaaattaattgccactcgcagcatatgtgagagaaaaatacaagaacgcagcgagttcaaactgatttacttttataggcacaaagccctggctctgaaaattacgagtgcctcgttctttcgagctgataaaagtgaactaatcacactcggagacaattgcacacagaggaaatgagccgagtgagctcgctatctacagatgtctaattgatctcactcgtggtgaacttggggtcatgttcttctactgctgactaaccgtcttcctttcgcagaaattcactcactgatactatgattcagatctagaagataaggctcagccgttgtggtttaagaccaaaatgaaacagcaggctgagcttctgcgatcgcaaagtaacaaggataaattcacagacccattgatcctagaacaagcattcactgttatcacaatctgaagtcctttaattaatatccgacactactaccctgcaatagtttgtcacttggacagcaaggtccaactttgcacaagtcttgtgcttacaatgtaatacttttaaaccaatccccgctcatccgtttccaaacgaaacccctgaattagtggaaacatatgcatcatgctcgcaggcaaacaaaaacatttcatgcaaaaaaggtttttaatttaaatttcttgacttgacgtgtggcatgtgccgtcgctgtcgtctttgtcccccgatgtctgagtctgagtcgagtctcattctcagttgccgtctgagttctggagtctgcacaaatgtgggcaagaggccaaagtctcggggggggggggggcgagggggcagggccaaagaaactacccacatactccggcatacattggccatgcacaattgacgcttacattgttctcaagaattattatgtggttcccagcatgtgtgctcctggtttttagttcctgtttccccagctcctgcggcaaccttatcactttacctacaggcggcaacagcagccgaaattggttacaatctcactcaaaagaatggccattttatctgggccatcaagttcaacacaca

PCR verification status

Line verified as correct.

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