| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT50109 | chr3R 26587635–26589742 (2107 bp) | zfh1, CR43238 |
      active |
lateral epidermis primordium subset, brain primordium subset, ventral nerve cord primordium subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | middle | 2 |
| 4-6 | yolk | 2 |
| 4-6 | head mesoderm AISN | 2 |
| 7-8 | head mesoderm anlage | 2 |
| 7-8 | trunk mesoderm anlage subset | 2 |
| 9-10 | lateral epidermis anlage subset | 2 |
| 11-12 | lateral epidermis primordium subset | 3 |
| 11-12 | brain primordium subset | 3 |
| 11-12 | ventral nerve cord primordium subset | 3 |
| 11-12 | dorsal vessel specific anlage | 2 |
| 13-14 | head subset | 3 |
| 13-14 | dorsal vessel | 3 |
| 13-14 | brain subset | 3 |
| 13-14 | hemocyte | 2 |
| 15-16 | head subset | 2 |
| 15-16 | dorsal vessel | 3 |
| 15-16 | brain subset | 2 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0004606 | zfh1 | 4013bp upstream | BDGP FlyBase iFly |
| FBgn0262883 | CR43238 | 14742bp downstream | BDGP FlyBase |
| FBgn0039801 | Npc2h | 15624bp downstream | BDGP FlyBase |
| FBgn0039800 | Npc2g | 16651bp downstream | BDGP FlyBase |
| FBgn0039799 | CG15543 | 17999bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
gagatttcctggccaacggagtgtttaaccttttagcagctaatgttacatctatttgaaggacgtgtccgcaaccttttcgaaaaccgactcaagtatttgctcagctgagcgtgagtcctgtgacgtgtgtcctagtatctgtttcaattttcgttaatttccctcgaacgcaacgcaaacagtttttgcgtaaaataaacacggtctagaaaatattaaattaccgaattcgagtggggaaacggtaaagttttccaaaatatgcgggcaaacttcgatcactcctttgctctctatctctatctctctctctttttctctttatatatttcggaaaactcactcctctacattttcaagcccttattttacagtatttccctcgatagttcaggtaaaccgttaggctgcttagaactacaaaagccgaaccacaaaatcagtgccatacaacgcacacgtgcccaaatatttccaatatatctaccctctctttcccgcaaggaccttttccagctgcttttctttttgtgaatgaaaatgggcacggggtttaaggctgtgcacagacattcaaatgcagttcgaaacaaaagtcaacaattgacagttatgaaaacagataacgatgatcgctctgacaacgtttacgacgttgatgatgatgttgttcgggttgtcaaggataacagttgctgttggcacacttcaaggatcaactgaaaggataagaggagaaagaaagcaggcaagcggggcgctagtgtgagtcaatcaaattgtcttattaaatagttcactaaaaatttgaataactataaaccttaaggttagctattaatgattttcgacattttattaattgcctaaattagtggcaactgtaaccctcgctgcttataatatttcattatttccaagacaataaccaatcagtttacgctgctttccacgaaaatcaaaccaggaatcgcactttgcgcctggaacgagcacttttcacgagggggaaaatcttcccacacgagaaccacacacttgactaaaaccaccgccccaatcaagttctaacccttgaaaaatagaagggggaaaatggggctcagaccgctgtacatgcattttggggacgatgaggaaatttgacatttccccgccgccacttaaatgtcacataaagtgttaaacgaaatgaggcaaaggcggccgcagaacagaggacacttgagatttcgattccgatgccgagagtccgatgtttgtggcgaccccaaaaatgtgcatcactctgcaccaccgaggccagcaccagcagcaccaccaccaccaccaccacaccacaccactttctatgccatatagaaccaccacattctgaaaagtatttacgctgtcattacttttcggttcggtttcgaattgaattggtttcgggttcttttgtttttcggggccgcgcaaagtttactgctaattaaaaattgtggaaaaacgagaaacatgcatgcaattcaatcccaaggagtgtgggaatgcgatgacccatctggagatctgagatttacagcaaacaccccgaaaaggattgccttttcccagagtcctttgcttcatcttctcgtcgatccgacgattgtaaagtgaaattaattgattcctccgtcgatgacgtcaatgcggaaccatcgaaagtacttagctaactctattttatgtgggtaccagcagcggtgggtgagaatttccaaagtcgtggaagcccaagctagtagcaatcggaaaatgatcgacaaatccaatttaaataaagaacctacagtgggtgttgccttcgagagcctgggaagaaaatccttgagtgcgaatgcgggacgtggtaattgaaggtactcgccattgaactcggatgcatttcgattcggatgtgtgtcaattaagtggttaatgagggcaactcctgggggaacaggaacaggaagtgctgggaaacagcaatcgtcctgatcctgattaaaaatatatacttatgaaggcggattaagatctacaaaactcggggaggtacgagctcattgcaagagatgaattattttcaagtccagaca
PCR verification status
Line verified as correct.