| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT50151 | chr3R 26669271–26671386 (2115 bp) | CG15544, tll |
      active |
head subset, anterior ventral nerve cord primordium subset, anterior ventral nerve cord subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | procephalic ectoderm anlage | 2 |
| 9-10 | head subset | 3 |
| 11-12 | brain primordium subset | 1 |
| 11-12 | ventral nerve cord primordium subset | 1 |
| 11-12 | anterior ventral nerve cord primordium subset | 3 |
| 13-14 | ventral nerve cord subset | 1 |
| 13-14 | brain subset | 1 |
| 13-14 | anterior ventral nerve cord subset | 3 |
| 15-16 | not active | 0 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0039804 | CG15544 | 1516bp downstream | BDGP FlyBase |
| FBgn0003720 | tll | 8766bp upstream | BDGP FlyBase iFly |
| FBgn0027598 | cindr | 16545bp downstream | BDGP FlyBase iFly |
| FBgn0039805 | Cpr100A | 23972bp upstream | BDGP FlyBase |
| FBgn0039806 | CG15545 | 27390bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
aggatgggatggaatgagtttgggacctggccgtgccctttctgcggtcagctgcctgatggacatctcccgggaggaggagctggctttcgagattcgagatgggtcaggaactggttataccgttgcgcttaagtgcggcaattaccggggcgatacagttctctgcgccttttgcaggagtgaaagaacttaactgaaatgcagtatgatgaatgctggggaaacacgtttcagttccaacggtgcacagaaaatagcgaccatacgtttttaaaaagcatcagatatttttagcatgatatgaagattgattagatacatatttttagagatattatctctagatggtactaaactaaagaaaacttaagcattgcaccaactggttaaagattaaaattaaaaattaaatcaggaatacttttcattgttgcattgtttttggtgtagactctcgcatttagggggcgtcaataaatttgaaaactacatgaccgccgatcgcaatgacaggttgaacgctgccacgccccccgcccccatgtcctggttagtggctttttaatgcggagggcgtggcgccgcaatgggcattctgacagctttccaaaaggctgtccaccggcttcattaagcccccgatcttgagctgcatccgcatccacgtacacgcgagatgaccagcttccttttacttttgccttgagcagctggcaaattgctcgcccattgatctggcttacaagaatcggcacttttcgcctagccagcgtgtcctgttaattatttcggtcccatgaaaccacggccacttaatgaagtcgcccccatgcaggtgagctcggtgaacaggcatgttttaacaatttacgaaccattttattcaatatacgagtcgagtggggatggctgatcgatcgcggctcggaaatttatgacatggcattataattgaccgatttgtcattataattagcgtgtacacagcccagacagcgcagagcggcgatcctaatttatgcatattgggtggattattttcagagaggacaacgtggtgataaaacacgaaacattgttgcaacgagcggaagatgtacttcagtaaatcacttttttattacaagctagcaatattcataaagaatgaagaatgcggggatgatgaaatagtgaagaaaatactactatacggtaaagatcaataaggatatatgttttcttttcaaagcatgatcatttatataaattagtaagatataaatctataatactagtaattaagaccagtcttactatgatcaaaagtactaatatgactatatacaccataaaagtatatataatacacatttctctgcttttatgttctttacttctcatatagatttatacattaattttacacgatttgtgtcaaaacttgtagctgtattgaaatcaagtatgcctaaaagcatgctagtttttaaattaacatgactttcagtggatattcatcatattgtggatgattttatttaaattaaatttaaatttgtttcttgctctttagtattgtttgaaagccattactttattatttatgtcatcagcaaatgttactaaacggttatctcttgtgatatattcgttgtaaaggtaattcgctttacccttgttcataaattcccaaccacttgaagatattttcaattaaagaaagtatttaaacagaaccaggccaagcgaaacgcccacaaaaaagtgcaacaccggaaaagaagattaaaattaccaaaagtcatgaatcaagctgagaagttaattcaacaaaaaaatcaagagggacggtcagatgttcagacaatgaagaatgcaaatcattgcactttcgtgtcctgtgaatcctgcagactgcattcgatttggagcacaactaatcgtccgccggcaattagcaagaaaagtattcctccgcattcaacactttactaatctgcaagtgtcaagcggccgcaaatgatgatggcgatgacaaaaggagttgacaggcaggacattcggggcaggagtgcaggactacaggcacgggtgcgggttccggagggttgaagtgtgcgttccgggtaaa
PCR verification status
Line verified as correct.