Fly Enhancers @ Stark Lab

ID Coordinates* Neighboring genes Expression
(4–6, 7–8, 9–10, 11–12, 13–14, 15–16)
Strongest annotations Order
VT50194 chr3R 26747544–26749726 (2182 bp) Ptx1, CR44041 activityactivityactivityactivityactivityactivity
active
midgut subset, midgut chamber, ventral epidermis primordium subset VDRC

Annotations

stageannotation termintensity
4-6not active0
7-8not active0
9-10ventral epidermis anlage subset2
11-12ventral epidermis primordium subset3
13-14ventral epidermis subset3
13-14midgut subset4
15-16head subset3
15-16midgut chamber4

Whole-slide images

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Neighboring genes

gene IDgene namedistancelinks
FBgn0020912Ptx1overlapping BDGP FlyBase
FBgn0264833CR44041overlapping BDGP FlyBase
FBgn0039810CG1554913574bp upstream BDGP FlyBase
FBgn0039811CG1555014767bp upstream BDGP FlyBase
FBgn0053483CG3348319662bp downstream BDGP FlyBase

UCSC snapshot

UCSC snapshot

Sequence

ggcgggaaagcagaacaagaaaacaacaaagcaccagcacagcaggaaaatcaaactcaaattagtcgctggccaaaatgctggggaaatatttacacaaatgaaaatcgccgtgctacgtgattttcgctgcgttttttcgaattccccgtattttttgtcggttcggttttgtttttagagcgtgtcgttaggaaaatattttacgatacgaagaatgggcgatgacgacccatttagctcaggtcggaaatcggatttgggatcgagaattggagcaaagatggcctattccatctattcggattcattcagctgtgtcttcgaattcaaaggttgcaacgaggcgttcactaaaaaatgaaagtggaaatgaggatgcagtggaattggtgcgagaagtggagtctcacatgacaaataacttatgacatattaacaaattaacagctgaaatgaattttcaaggcgactggattttttttaacaattttaatcgaacttgacaaaacatttatacaaaaattaattcgagcatatttgtttttccaatttccctcccaacatccaagacgctcgtaataaagcaatgaaattttaattaccccaaaacgcactcattagaggccataaaaatacttttcacgcagaaatttgaattttccaacggcatgtgaggctgttgtcggcggcataaattatgcaactggcaataaactaattgagccatgggccacctccaaggagatgacatttgtgactcctaggggtgccggaatacccactccccctcccgcacccaccaaaaaggagcaggctaattgtttcgaatgtcgccccgggtgtttgctcactttaaaaaccactttaaagtgacagcatgtgagaaggccataaataatcagcggtatgcaaaggaagtggtccagaagatttaggagaaagtcgggaagtcgggatccctaaccatatgggtgcacaccttccacttcgcaggaaaaccccaagaaatcaattgccacggccataaatctgtgacgaaatagctttttttttggggggggaatcatgccaatagctgagtaattaataccaaaataggcgtgactaactgcggcaattattacgtagcaaattgagtcatttggcgccggtagatttatggggccaagcggccagggcgattccctcgatttagtttctccatggcaactctttttgagcccgggctgaagttttataatccagcccctggaaacaattaagttggcctcctccaggagcaatacgctttttaatcgggttaaccaagaggccatttcaggctgcggtatcataaatccttttatgagctcttttacgggctcctcttttctgttcagggaaaaaggaatagtggggataacaaggtgggtggagtttttccgcaggggaaaatatcttttaacgttagcaagaggaggctgtagattctgtagattcaagctgaattgtatttaagataaactaccctaagctagacagttttagatgttttggttaaagcataaatttttttgtaattttctcttgcctgcgctggcttgttcttttcagtttgggccgaaaccggcgatttccgtgatagtcatagctccatgaccgccgtagcaaatagtttggatagcacccacttgaacaactttcagacgtcatcgacatcctcgatatcgaaccggagtcgggatcgcaaagatggtgagtagcagtagctgccatatccgtaacccccagcaccaccacaccaaaagtgctgttcccagaccgtatccgctatctccggcggcccatcgataaggaacataatttataataatttcggaaagcgtggccaacgattccacctttgtcggcgaaatttactcggccgggtccgtttagttttcgattagactgcctttgatttgcgacctcacgacgacagcagaacagaaaaaagtgagaatggagccgaacgaaaatgatatttcacaggggcagtaatttagtttatttgattaagttttcggcagctacgaattcgatttggtctcactttctggcttccctggcccagaacatacgaaaaaacacaaaaagcacgccgcatgatcgatgacattcgggaacatacattaactggttataaatctgtttgccggcgg

PCR verification status

Line verified as correct.

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