| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT50196 | chr3R 26750978–26753206 (2228 bp) | Ptx1, CR44041 |
      active |
posterior endoderm anlage, ventral nerve cord primordium subset, posterior midgut primordium | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | posterior endoderm anlage | 3 |
| 9-10 | ventral nerve cord anlage subset | 2 |
| 9-10 | posterior midgut anlage | 2 |
| 11-12 | ventral nerve cord primordium subset | 3 |
| 11-12 | posterior midgut primordium | 3 |
| 13-14 | ventral nerve cord subset | 3 |
| 13-14 | midgut interstitial cell | 1 |
| 13-14 | midgut subset | 1 |
| 15-16 | anterior ventral nerve cord subset | 2 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0020912 | Ptx1 | overlapping | BDGP FlyBase |
| FBgn0264833 | CR44041 | 2874bp downstream | BDGP FlyBase |
| FBgn0039810 | CG15549 | 10140bp upstream | BDGP FlyBase |
| FBgn0039811 | CG15550 | 11333bp upstream | BDGP FlyBase |
| FBgn0053483 | CG33483 | 23096bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
cgatggtatttgtatctgtgggaaggtggttctatagaactctataactaacgccaatactttttcagtagtttatagtttcaatagtttatgctaaatctttttcttgatttatatttattttgaaagtttttaatagaggagtaaggtacaccccagtgtggaaggtctcttcatcgggagcaaaaactaataacaggggcatcgagttgtacaagatatcttggccacacaagcgttgtaattgtttgtaaacacgatagttagttgggcaaacaattggagttgtggcgccagcgcggcaaatactcctctgatatcgaagatatctgcggctatatctctattaccatttccacttccatttccattcgccgtcgaaacggacggaaagacaatcagcagacaggcgaagatatgatagacaaatgatcgatgatcgccggtgattgctgatgatgatcgggtttgtgatcattgtcattggacgtatggcgacattagcgtggcattaattgtacagttagaagtggctgctatcacagccatccgagtgcaattgccgcggaaaaggagaacatctgcgaggaaggcgaatgcttcatggttttcctatgcaaatttccctggactttcgcatatgcccagaaaaatcgacggaccgacccccttgcacttgacaacatttattaagaaattagctgcggcccagaatgacaagggacggagccgggaatgatggcaatctaaacatgtgttcctcgcataaagcagctaaatgcataaaatattgatacagtttgttttatggtccattatatgatgatgacaaaaaggttggctcggttgctcactttccgctgcttccacccctcggtagatgcaaaacaatgcccagactatttgtcatcgccagccgagggttgtttaatgaattagaaaaccgcacacgaattaatgatgatcgcgatcatgcctttgcgactgtctgaggggtggctcacatttgactttgactccgactccggctgcccattgtaatagcggaggcaataaaatttatcaaatatacaaaaggattacggcccactggcggtgcaactccgctccgggatgggccgtataaatctggccgggctttaaactgtcaaaaaagagcagcccccgtttccatttcttcgggccctgatagctactaatccggggatttacatgcgccggcaattatggcaatatgttcgccccgtctgtcccattgtctcagtgctcagtgctcagtgctcagtacccagtactctttcttcactcttccgctttttaatgtgtcaaatagaactcactttttaattcaattaccagccaaggactggcaaaaaacaaggcccatataaaagcatttgtcgctgccctcaatcggaggtggcatcgagcatcgatcgaatccatggggttgtatcgagtgttttttgccagttctttttatggtcaggtgtcggcaatggcccggaaatggaaacagcatttgccaatcgctgaaagtgtataaaaaagccattgaaagtggccacaaaggagccacaatatgctggcatgattgcagtttgaatggttcaatgtactggataagttgggaaagaggaatcacacaaaaaaaaaactgggttatgccaaacaattgtgatatttttataggctatacaatgaacccaacataaatatttgagcttaaataattgcgtttaaaatgttgctattggctactgtgcctttggtgtcttcctcgaccctttgactttatttactcctgtaatagccgtgattaggctactttttgttcacatatgtccgtatatctgcagctgcagtcgaacatcggaccaattaataccggcgatactctgacgggagtgtggtagtgatgtatctgtgtgtcatccagacagttgagcacacaaagagacaacgctgcgtggagtagttcacgtatcgatgttatctgctgattttcacttgggctgggctatcactggaatagaagaaccccggaaatgagaacccgtcccatttcacatttaacatttcacattgggcaaataaaaaacgtatttagctgcaatttgcgaccatcaatcatggcagccagcacaaaaaatgaggccctaacttctagtggccacatggccacttttggccactcatatctttttgccacgtccaccatttacctga
PCR verification status
Line verified as correct.