| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT50228 | chr3R 26818066–26820196 (2130 bp) | 5-HT7, CG31007 |
      active |
epipharynx, clypeolabrum, head subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | not active | 0 |
| 11-12 | not active | 0 |
| 13-14 | head subset | 2 |
| 13-14 | epipharynx | 3 |
| 13-14 | clypeolabrum | 3 |
| 15-16 | head subset | 3 |
| 15-16 | amnioserosa | 2 |
| 15-16 | clypeolabrum | 3 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0004573 | 5-HT7 | overlapping | BDGP FlyBase iFly |
| FBgn0051007 | CG31007 | overlapping | BDGP FlyBase |
| FBgn0051008 | CG31008 | 2339bp downstream | BDGP FlyBase |
| FBgn0062411 | Ctr1C | 28025bp downstream | BDGP FlyBase |
| FBgn0039812 | CG15548 | 30038bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
acatggctgctccggctgctttggcgccgcatagatcctgtggatcgcggcccttccgaacgttggcggggcatatcctttcaaaaatgagcagacggcaaatgtgaaggctgacttgctgaaagctgaatttagaatgaaatggcccgacttttgacctttctagactcgactaacacagccaactgtattataaagtttccccaacggaacacttgaactttgtccgctaatttttattgcacggtttcattgtgcacgacataaggttacatattacattatctttgacgcgttgggaataagtaagatgtactatggacttactagtctccagttcttatattttgaataagtgtgccactttagatattgcatttatgttataaaaaaaagatatttacataatgtctatcctcgagtgccacattaaatacaccgctccattggcatcgtattcatataggcctcttgctcgggcctttcattacttttgacagcagctatattatagttctggcgcaaacttattgcacactggcgaatcgagatgaattgggtgggagatatgcggatttcatttgcattcacgacaattctgggggctgtttcccacatattccatttgctgtttgctgatctgcgacagcccaaactggcacgctttcaatttggaactgcacttgagtgtctgaatgggcttgagtttgcatagctgcgctgattgcactttgtgtaaattaggcgacgccggccgcagtgcgtatgattaatatgaggactggaagtgggggaagcggctcatttctggccctcatttgcatttctggcactagctctgaggctaattctcggctcgcaagtggctctcaagtgcttcccattacaaccacctccgatatccgactttctacctttgtatgcctcaattacctgcgccgttttccccaaaactggttggccgtttgaaaaaacacaattaaagtcggcacctgcacaccaactcgagcattcataactgcatggagaatcggggaatctacaatagaatcgagaaaggtgaatggtgaatggcgaatggccagcatttcaaatgcggtaaattacagttaacgattttgtagcacagcaatttgctttatcttcagatgtctatctacggtttgtaaatgtacttccacgtagctgccccgaacgccgtttgctttgcatgtcggccgatggattctatccgtacatagtactgcagtactacacaaagccaacttctctggtcattggccagaactaaagccaggcccatagtggccagcaccctacactgggcgaaagtttaataaatcgcgagatataccaaagctgcacttctgttgggcgaagaccttagaccactcaggcgctaaactatgttttacttctctgaagtcagaagttactgcattgctatatacaccatggtgaatgctttttctcgcagtgtgtgtatttgcggttaacaaatgtaggaacaccgccataaaggtgttgaaataactgctgcaccgctgaacccggctcctttgtttggctttcgttggcggcgttcttggccgattgttatggcgttttatggttattgtgtcgggggcgcaatgcaaattgccgccacataattatgtcgcagtcgaggggaatttatatagtatgtagccggaatacgaataggccagctggacctgctgccaacaatgggaaaatcagtgcgactttgaggcttcgggcttcaaagtttcgcaattgaacggaaagttgtggctttacacacctggacaagtccaacttttccatgtctaattagcaagcgacagtaacagttccagcaaactaatttatataaaaactcgctttggcttggcaatcaaataatagagagagaacttttaatttgccaacgccctgacaactcacgcaatggaaacacggaaaattcctggcgtcgggcgaaaaccaacgagtgcgaaacaaaaaactaaagttgctccgacttttacctcagttaaatcagttactaattgcttcgtcctcggcaggtgataagaaagctatttcaatctaccaacattgtggccatcagttcgtagttgggaattgg
PCR verification status
Line verified as correct.