| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT50550 | chr3R 27435412–27437516 (2104 bp) | CycG, Med |
      active |
ventral ectoderm anlage, ventral epidermis primordium subset, head subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | ventral ectoderm anlage | 4 |
| 9-10 | head subset | 2 |
| 9-10 | dorsal ectoderm anlage | 2 |
| 11-12 | ubiquitous | 2 |
| 11-12 | ventral epidermis primordium subset | 3 |
| 11-12 | dorsal epidermis primordium subset | 2 |
| 13-14 | brain broad | 2 |
| 13-14 | ubiquitous | 2 |
| 13-14 | ventral nerve cord broad | 2 |
| 15-16 | brain broad | 2 |
| 15-16 | ventral nerve cord broad | 2 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0039858 | CycG | overlapping | BDGP FlyBase iFly |
| FBgn0011655 | Med | 1356bp upstream | BDGP FlyBase iFly |
| FBgn0039859 | CG11539 | 5594bp upstream | BDGP FlyBase |
| FBgn0039860 | CG1792 | 6613bp upstream | BDGP FlyBase |
| FBgn0039861 | pasha | 8287bp upstream | BDGP FlyBase iFly |
UCSC snapshot
Sequence
aagctttgtacgtttgcacttggtccttttcaatttctattttctattcctaagcaaacaaacacattcaaacactcgcgctcgcaaaaacggtacttctccgctttgttgtttttttacgaatgaagaatattgtgagcgaccagtgttaccagtaggcctacaagttccacagatttggtgcgaactgaaatttgtactataaaataccctaagccagcggaagcgatagtccctcactatcgatgtgtatgttattcgattctctctgttaactaacatttcgctgtaatgttatcgaaccctaataagcccgcaataattcttttttgatgtcgaacaattttgaacaccgaactcaaataagcccgcaataattctttttggtgtcgaacaattttcaacaccgtaagcctgatagggattaaataataactttatgcttctgaatgcgggatgtagacaattttatgacaagtgatttaattagttagggaattaaaaaatatgagggcaacaaatcctcgaagttaaattgagttcccaaattactattacaaatggaagcttctgttttggcagggaatcgcaaacttcccacacataatttcacaatcaatgtcattgccaaaatataaacatatttacatatgtacgccgcaaatcgaaattccgttcagataagcgttgaaattacgcattttgataagatattttgaagatggaaactacgcagcaaactgttttacaaaagccggagaaatgcatttccggcgaaaaggaaattcgttactgttgccaagtgaacattttcaagagaagaggggaagggggtggtctatttcaggccccactacacacacatgcatatttctagaaacaacctgtcacacaaacgactcatcaacggcaattttttatgaatgaattttagcaattaaagcaatggaaagaaacttttcaatgggaatgcgaaaacatcaattaacttgttgcacaagatgttcagccttcgattttccccaatctcaacgataagaaactttcctcaatttcgtcacacacacacacacatgcgaatgggaaaaaacgcgtggcgattgattttcggcctttcaaaaagttcgttttacgcactgaacagcccgcgaaatgagtgtaagtcggtgtaacaaatctcatggcacttacccggatgcctctgcgttttgatcagtatctgcttttcttgcttcttatttccaaaaaatataaacttattctcaaatcaaatcttcgagaactgaccaaactaggtgtttgtaaaaatccaaggtaggtatttcgcgctttgcccatctggcaacgcccgcccatgttgtatcgcgaaacggtcactctgcacagccgcaacaaaataaaaaaggaaaaaaaggcaaattggctggaaaactggatttcgtcgggcggaaaattgtactttcgagtttcccaagcagccaattaagtgcaaactatgaaattccacgaaaaacagtaaaagccagtctctaccaaggatttgagcaggaaacttctcgctgggcgtgtgtgtgtgcagtgcgtgtgccagtgtgcgtaaagaaggaggtggagaagacgaaggagaggagagttttcgcagggaaattacgccaactttgtgggagttcaagtcgagttagttcagcgcgcgcgtgtgtgtgtgtatgcgtgtgtgcaacaccccccaagcccactcacacaaagccatccagccgccgtttgttttgtgctcacattcgcgtgccgcctttgtttggcttttctttggccagtgattctacgccttgtttttgcccgccgccggcttcgattacgcctgctccagccaccgtacgatccccactccgctctccgccgctcacgatccccattccggatccggatccagcaacaacgccgccgtggatgcccatgctcgcactctgggctcgctcgcccaggactttggcatgggcggcggctcgggggcgtgtccgcccgcccacatgtacggcgccgtagccccgcaggacagtaagtgaagttctctagaggagcagcagtcatagtgaactccttttcga
PCR verification status
Line verified as correct.