| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT50608 | chr3R 27547940–27550042 (2102 bp) | ttk, CR34046 |
      active |
hypopharynx primordium, hypopharynx, clypeolabrum | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | not active | 0 |
| 11-12 | ventral midline | 1 |
| 11-12 | hypopharynx primordium | 2 |
| 13-14 | lateral epidermis subset | 1 |
| 13-14 | ventral midline | 1 |
| 13-14 | hypopharynx | 2 |
| 13-14 | clypeolabrum | 2 |
| 15-16 | head subset | 1 |
| 15-16 | lateral epidermis subset | 1 |
| 15-16 | lymph gland | 1 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0003870 | ttk | overlapping | BDGP FlyBase iFly |
| FBgn0054046 | CR34046 | 12431bp downstream | BDGP FlyBase |
| FBgn0039867 | CstF-50 | 13285bp upstream | BDGP FlyBase |
| FBgn0261583 | CG42693 | 13879bp downstream | BDGP FlyBase |
| FBgn0039868 | CG11563 | 14817bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
ggagcacgcacgcatgtagaaatcacaggctctggtggttttcggttgactcggcggctcagttagctggattttcacacagttcgatgtgttgcgggggcgactattgcgattgtgtgtgggccacatgtgccaagtgtcacgcacacacacactcgtttgggtagtggatatatagtattgtatgtcccccgccagacgagacttcaaccacaacaacagcattcaagaaaactagcaccagaaacccactttaggccgaagatattgggtaacaattggcaacctctgaggcccaaagggtctataaagcccataaataaacaggttcattaagagatcaggtgagacaatcaccttgtgcggcggaaagactcaccatgatggtcgcggataaaggtcgggtgctctgaatggcatgagatattaatttctattatttaaatttctccagattagccgggggagttcgataatcaagaaaaggctttaaattgctatccaaggaccaagcaccttccaagaagaaaaattatataaaaaagaagtctcttaagtcagctgtcatgggacatgcgaggcacaagatttccattccttactggctgtgaaaatcccacattgggaaactcattcgttataattgcccatcctcactgccacatttcaaacgggtcttcctccgtgcaatgtacaaattccgttttcactcccaaccgaatttgaaatttcaacatcatcatcgtggtctgtgggagaagaagaggaagcatcgttaatttgtgagccctgtcaccgattatacttccaacctccgctctcgcacacacacatgcatctaccgccccacggaacttattgttgtagctttacgctgataaaattcaagcaggagagcattccccgctgacaactccccccaccgaaaccccttttttggggagtggggagaggaagtcatgaagcgtagatagagcggtttatgtgtacgtattagaccagcgactaagtagaacggcagcaacaatagcaaccactgcacaaaaaaggtgcgagttgaggatcaattagatcgcatacatacatatatgtacatatgtgtgtatacgtatatgtgtgtatatgtacatataggaatgatttcaatataattaagggaagttacattgtcctagatcatcagctgtcatatactgcatatattctaagctgatgtgatctgatgcgatgcgagttcaaaaagtaactacatacatatgtatgtgtacttaaaactccgccctaatggcctatgatcctatttctcaccgtgcagccatgcccatacaatggacccatagacccgagagccggagtcagagttccagtccctggcaaagctccacaaaagccactcaaaagtagaaaaaactacacagtctgaaaaaatgaaataaaaaacaccaccaacaacacgcaatagggcaaggcaaacaacaacagcggcagcgacgtcgactgagaaacagcaacaggaatttacgattcagtgactaccttattgttgttgtagttgtctagcctgtgtgtgcgagtgtgtgtgcatttgttgctatttcacctgggttggggagctctatcgttgtgtgtgcgtgcgtctgtgtgtgtgagagcctattaggcgaaacgatcgtttccgttgcaaggggctaaggggtggggatggtgtgttgttgttgctgccgttacgccttcagccagttaataatagacaacaacaacaacagcagcaacaaaatacccaccaaggtgtgtaggataaaaacacacgaacaaattataaaagagcgagggaactgtgctcaaagctcgttgcttaggatccgatccccaatggctgttgagtcaatccacttgtagaatttacagcccgcttacgtaatccctctcctaaaaaaaaaaacctcagaaaaacgctcctgccaaccagccagcacaaagccatgcagtgaaacacccattaattttgttgttgtgaataattacatatttttatgatcctcgtcatattttttgtgaagtgcctttttgagccaaactttgttatttcgatttatgttgtga
PCR verification status
Line verified as correct.