| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT50669 | chr3R 27662842–27665967 (3125 bp) | RhoGAP100F, heph |
      active |
posterior endoderm AISN, anterior endoderm AISN, anterior endoderm anlage | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | posterior endoderm AISN | 3 |
| 4-6 | anterior endoderm AISN | 3 |
| 4-6 | mesoderm AISN | 2 |
| 7-8 | posterior endoderm anlage | 2 |
| 7-8 | anterior endoderm anlage | 3 |
| 7-8 | trunk mesoderm anlage broad | 1 |
| 9-10 | not active | 0 |
| 11-12 | not active | 0 |
| 13-14 | not active | 0 |
| 15-16 | not active | 0 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0039883 | RhoGAP100F | overlapping | BDGP FlyBase |
| FBgn0011224 | heph | 9867bp upstream | BDGP FlyBase iFly |
| FBgn0266268 | FeCH | 24825bp downstream | BDGP FlyBase |
| FBgn0039882 | CG11576 | 26935bp downstream | BDGP FlyBase |
| FBgn0039881 | CG1971 | 30352bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
ggcaatgatgggcggtttggtcaccgccgggagcatgagcaatatggccggtgttgcttcaggtaacgtactcccagcgtccgattgatttcctaccccagagctaccagaaagccccatccccaacacttaacaaaacacccaccgattattgccaccacacttgcaagagtttgattcatattttcgttcctgctttggatgcatagctgcatcagcagcagtttcaagtccaaatctgtgccacccgctcgttcttcaatataaagtgcgtcacaaaaccgttcttactgttagcttttatgcaacctacccagacagaagtacacaccgtccccatcacccacacacaacggttgccacttccaatgctattttcagcttaattacgtcttaattcaaagccagccacaattttgattccgattttaatgccaataaagtgggtgcgatgcacaatttgtatgattggaagaacgcttaagaaaacatatgttttgacttgactaaatcaatagcagaatatattttaagacgcatggaagcaatcaagtggtaaccgcagtcctctctcacctgaccctctcagccactgaaaacacttcaaagcgcgtccacattaatattgattaatacagagtcctatgtagacaggtcggcgcggcgagtcaacagggcagcgtggaagcaaagtcagtgcgttgccagcggacagacagcaacttctactgcagcagcaggcgcagctcatggcggcgggcaatcttctgcgctcgtccacttcggtaaccaacatactctcccaaggccatcctcagctctcagccacagccaacaatcatctgtatcaatcagtagtgggtcagttagctcaatcgcatcgagccttgcaacaagcggtgcaacaggtaaacaaacagaatccacacaacacagcaaccaaaacaaaacagccgaagacgcgaacaatgaatacaacagagacatacttttccagaaaacttgcatacaaacatatcatccaccataaacccacaccacacacacacacacacacacacacaccccccccctaacatccatatttcaatgtgatggggcaaaagattggatgcattttaaatctaaatcatgcattttaaatttaaatctaaatttacatccaagtcacttttaaatttgtaattcctgatttcttcaaactaagggaagtaactttacagaaaacaagagaggaggctatagtggccattagagtgggcgggtctaaacatttttcgcgtattgaaagaagctggtatgacaaatattaaaatcaaaacatgtcacaagtgtgggcgaaattcctgttcatatgggacataacgttcatttagttatttattcgggaaatcgttaaccgtgtcattttcattattatcattcattttacactaaccctaaaaacacggatacacagaaacacgtacgctgaaaaatgttccttcttcttttcctgttgaccgttctgcaaaagatgaaagtttaaaaaatatttgtccattgaactattcaatattgaagcattatctgttattaactttttttttgctttttatgaaaacaatatattataaaacctatattataatagtaaagtaaacaataatttgctgtgatccttgatcgatagacgttgtaattgtgatacataaatgtatacgtacattcataatctatacatcagtctgacataatgatggtgatgatgttaatggtgttaaacggcgtgcaaagcatgattggcccactactggtaacaaataaacatactcgtaacgacagttttccccaaacataattatttcactcccatttaatatgtaaatcatacagctttgtatgcctacacataacaaatgaaagacacatcttataaaagcttcattaatatcgagtgccactgccattgtaaaaacttcaccaatcataccaaacttgcgtttcattggaattgcttacacacccgccccaggaatagatttgctcctcttgttggttcaagcccacaacccaagtccccgacaccttggcgcattaattttcccagagttcgaaagcacagcttaaatagtgtagaacatctcaaagacggaggggaaacgtatcggagcatttaattgttctcggaagttcagttgaatcctattccctaagttgaaattttcgtttaaagccttaaatccacagtccagtaaaaccgctcttactcaacgcactcagttcgacttaaatgtcactgaagatttttaaaagacacatatatatttttagttaacatattattgaaagtcaatttcaaatagtgaaattgaaatttgcttgcatgaaatacaaatcacgccttatcacaagccaataactttaccaatgcccacatagtcacccgaatcccaataataacatgtaattggttaacgaattggccgtcacctgtatgagaatcgcaccgcgcacgcagtgaaattgtcttttgtctatgaatataaatatgctcctgtatgtgtcacacatttacccacttgaaaacaaacattaacattaacactaagccccgaaatgattcaaaatttgaaattcttactgcaccacccaaaaccaagaatttgcacgtattgacgcccttaaagctactttcagccttaattgacgttcagccaacatataaccaactttgcgggaattcccctgctctcctttccgttcgttattttcttgcagccctatcaattggggggctcagtgggctcagcaattcccgacccatcgccactgccacttccaggcacaccctcccccggcagtagctcagcatcgacgggctcaggctccggatcgggtaaaagtaagtaaactcaaatgttcctacgcttatgtcggttgcattgtgtttgttattagagaggaaagataacgaggcttttgtaattttctgcaggcacggacaccatcaagcgcggtgcttcgcctgtttccgttaagcaagtcaagatcgtcgaccagccatccagcccatactccattgtgatgaagaaaccgccgttgcaaaaagatgcgcccgttgaaatcaccacccccaccacacag
PCR verification status
Line verified as correct.